ggKbase home page

SCNpilot_cont_1000_p_scaffold_874

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_874_1
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
Translation elongation factor Tu n=1 Tax=Legionella pneumophila subsp. pneumophila LPE509 RepID=M4SJ28_LEGPN
translation elongation factor Tu (EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_cont_1000_p_scaffold_874_2
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164..610
DNA (447bp) protein (149aa)
preprotein translocase subunit SecE n=2 Tax=Fluoribacter dumoffii RepID=UPI00026C78E0
secE; preprotein translocase secE subunit; K03073 preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_3
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

616..1161
DNA (546bp) protein (182aa)
transcription antitermination protein NusG n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78DF rbh
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_4
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1311..1745
DNA (435bp) protein (145aa)
50S ribosomal protein L11 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78DE
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_5
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1756..2451
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78DD rbh
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000313|EMBL:CBJ10807.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_6
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2629..3153
DNA (525bp) protein (175aa)
50S ribosomal protein L10 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78DC rbh
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_7
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3197..3571
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=2 Tax=Legionella longbeachae RepID=D3HPJ5_LEGLN
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_8
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3662..7768
DNA (4107bp) protein (1369aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
rpoB; RNA polymerase B-subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Fluoribacter dumoffii RepID=UPI0002E3EBDA rbh
SCNpilot_cont_1000_p_scaffold_874_9
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7814..12064
DNA (4251bp) protein (1417aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
rpoC; RNA polymerase beta' subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta'''' n=2 Tax=Fluoribacter dumoffii RepID=UPI00031F5A20 rbh
SCNpilot_cont_1000_p_scaffold_874_10
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12178..12558
DNA (381bp) protein (127aa)
30S ribosomal protein S12 n=1 Tax=Legionellaceae RepID=UPI00026C78D7
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_cont_1000_p_scaffold_874_11
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12578..13102
DNA (525bp) protein (175aa)
30S ribosomal protein S7 n=2 Tax=Legionella longbeachae RepID=D3HPJ9_LEGLN rbh
rpsL; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000313|EMBL:CBJ10813.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_12
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13117..15201
DNA (2085bp) protein (695aa)
elongation factor G n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78D5 rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
fusA; translation elongation factor G; K02355 elongation factor G rbh
SCNpilot_cont_1000_p_scaffold_874_13
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15374..16552
DNA (1179bp) protein (393aa)
tufA; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
Elongation factor Tu n=1 Tax=Legionella pneumophila (strain Lens) RepID=EFTU_LEGPL
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
SCNpilot_cont_1000_p_scaffold_874_14
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16587..17237
DNA (651bp) protein (217aa)
50S ribosomal protein L3 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78D2 rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 rbh
SCNpilot_cont_1000_p_scaffold_874_15
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17237..17842
DNA (606bp) protein (202aa)
50S ribosomal protein L4 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78D1 rbh
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_16
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17839..18135
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78D0
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_17
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18147..18974
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78CF rbh
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_18
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18993..19271
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78CE
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_19
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19281..19616
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=2 Tax=Legionella longbeachae RepID=D3HPK8_LEGLN
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_20
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19619..20275
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78CC rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
SCNpilot_cont_1000_p_scaffold_874_21
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20292..20705
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=3 Tax=Legionella RepID=D3HPL0_LEGLN
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_cont_1000_p_scaffold_874_22
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20705..20899
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78CB
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_23
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20901..21152
DNA (252bp) protein (84aa)
30S ribosomal protein S17 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78CA
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_cont_1000_p_scaffold_874_24
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21241..21606
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=2 Tax=Legionella longbeachae RepID=D3HPL3_LEGLN
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_25
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21620..21949
DNA (330bp) protein (110aa)
50S ribosomal protein L24 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78C9
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326, ECO:0000313|EMBL:CBJ10828.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_26
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21963..22514
DNA (552bp) protein (184aa)
50S ribosomal protein L5 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78C8 rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 rbh
SCNpilot_cont_1000_p_scaffold_874_27
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22546..22827
DNA (282bp) protein (94aa)
30S ribosomal protein S14 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78C7
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_cont_1000_p_scaffold_874_28
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22849..23244
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78C6
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302, ECO:0000313|EMBL:CBJ10831.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_29
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23262..23801
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78C5 rbh
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_874_30
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23812..24171
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78C4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
Displaying items 1-30 of 59 in total

View Taxonomy