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SCNpilot_cont_1000_p_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_219_1
unknown

Not on your lists

1813..1935
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_2
unknown

Not on your lists

2172..2618
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_3
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2631..3242
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JKB4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL61443.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
SCNpilot_cont_1000_p_scaffold_219_4
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3226..4173
DNA (948bp) protein (316aa)
HTTM domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3F1_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KIA96640.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
HTTM domain-containing protein
SCNpilot_cont_1000_p_scaffold_219_5
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4160..4900)
DNA (741bp) protein (247aa)
Response regulator of the LytR/AlgR family n=1 Tax=Saprospira grandis DSM 2844 RepID=J0P3N3_9SPHI
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EJF54444.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
two component transcriptional regulator, LytTR family protein
SCNpilot_cont_1000_p_scaffold_219_6
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4881..6008)
DNA (1128bp) protein (376aa)
Histidine kinase {ECO:0000313|EMBL:KIF27494.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
Putative two component system, sensor protein id=3728538 bin=GWF2_Bacteroidetes_49_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
signal transduction histidine kinase, lyts
SCNpilot_cont_1000_p_scaffold_219_7
unknown

Not on your lists

6236..6631
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_8
unknown

Not on your lists

6667..7122
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_9
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7145..7708
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF16139.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
SCNpilot_cont_1000_p_scaffold_219_10
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7689..8636
DNA (948bp) protein (316aa)
HTTM domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3F1_HALH1
HTTM domain-containing protein
HTTM domain protein {ECO:0000313|EMBL:AEE52928.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_1000_p_scaffold_219_11
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8605..8919
DNA (315bp) protein (105aa)
Putative thiol-disulfide oxidoreductase DCC n=1 Tax=Alteromonas macleodii (strain Balearic Sea AD45) RepID=K0EGA5_ALTMB
thiol-disulfide oxidoreductase DCC
Tax=GWA2_Bacteroidetes_31_9b_curated
SCNpilot_cont_1000_p_scaffold_219_12
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8945..11590
DNA (2646bp) protein (882aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00038099F2
Uncharacterized protein {ECO:0000313|EMBL:EAZ79570.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_219_13
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11587..12906
DNA (1320bp) protein (440aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN33298.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Ulilysin id=3138999 bin=GWF2_Bacteroidetes_29_10 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_cont_1000_p_scaffold_219_14
unknown

Not on your lists

13133..13240
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_15
unknown

Not on your lists

comp(13461..14039)
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_16
unknown

Not on your lists

comp(14330..14620)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_17
unknown

Not on your lists

15467..16321
DNA (855bp) protein (285aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_18
unknown

Not on your lists

17027..17419
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_19
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17696..18238
DNA (543bp) protein (181aa)
Collagen triple helix repeat-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQ72_EMTOG
Collagen triple helix repeat-containing protein
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:AFK01825.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_1000_p_scaffold_219_20
unknown

Not on your lists

18235..18825
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_21
unknown

Not on your lists

19101..19286
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_22
unknown

Not on your lists

19699..20058
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_219_23
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20070..20330
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VGH8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK60153.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_219_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20647..21867)
DNA (1221bp) protein (407aa)
tyrosine recombinase n=1 Tax=Dyadobacter beijingensis RepID=UPI000382B302 rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:ACT96417.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_1000_p_scaffold_219_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22263..23024)
DNA (762bp) protein (254aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] rbh
Hydrolase, TatD family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDC3_CHIPD rbh
Hydrolase, TatD family {ECO:0000313|EMBL:ACU57746.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_219_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23027..23596)
DNA (570bp) protein (190aa)
Polysaccharide deacetylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDC1_CHIPD
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACU57744.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_219_27
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23692..24438)
DNA (747bp) protein (249aa)
Tetratricopeptide repeat protein id=4854723 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
SCNpilot_cont_1000_p_scaffold_219_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24438..26474)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIH8_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU58167.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_219_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26552..27256)
DNA (705bp) protein (235aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIH7_CHIPD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU58166.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_219_30
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27308..28021
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SF49_9FLAO
ATP-binding domain-containing protein {ECO:0000313|EMBL:KFF10704.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
ATP-binding protein; K06927
Displaying items 1-30 of 116 in total

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