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SCNpilot_cont_1000_p_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_220_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2168)
DNA (2166bp) protein (722aa)
PKD domain protein id=3384300 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_cont_1000_p_scaffold_220_2
unknown

Not on your lists

2412..2789
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_220_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2773..4278
DNA (1506bp) protein (502aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATP synthase F1 subcomplex subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
F0F1 ATP synthase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI00035D04FA rbh
SCNpilot_cont_1000_p_scaffold_220_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4352..4606
DNA (255bp) protein (85aa)
H+transporting two-sector ATPase aubunit delta/epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000366F08B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_220_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4763..5962
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUD2_CHIPD
hypothetical protein; K09808 lipoprotein-releasing system permease protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59172.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_220_6
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5949..6905
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Porphyromonas crevioricanis JCM 15906 RepID=T1CQ08_9PORP
Uncharacterized protein {ECO:0000313|EMBL:GAL83843.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
SCNpilot_cont_1000_p_scaffold_220_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6902..7636)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036FF87A
Uncharacterized protein {ECO:0000313|EMBL:KIC91631.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K09797 hypothetical protein
SCNpilot_cont_1000_p_scaffold_220_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7761..8357
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003827B0B
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE
SCNpilot_cont_1000_p_scaffold_220_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8410..9585
DNA (1176bp) protein (392aa)
Chaperone protein DnaJ n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR67_CHIPD
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ
SCNpilot_cont_1000_p_scaffold_220_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9919..10578)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6H4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25818.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_220_11
unknown

Not on your lists

comp(10804..11712)
DNA (909bp) protein (303aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_220_12
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11817..12584)
DNA (768bp) protein (256aa)
Transcriptional regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQ18_9BACT
Transcriptional regulator protein {ECO:0000313|EMBL:EAY27427.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
response regulator of the LytR/AlgR family
SCNpilot_cont_1000_p_scaffold_220_13
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12653..15583)
DNA (2931bp) protein (977aa)
Two-component sensor histidine kinase n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VXP4_9FLAO rbh
Two-component sensor histidine kinase {ECO:0000313|EMBL:EPR74187.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
regulator of cell autolysis rbh
SCNpilot_cont_1000_p_scaffold_220_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15710..16582
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z865_AZOL4
protein of unknown function; putative glycosyl transferase domain
Uncharacterized protein {ECO:0000313|EMBL:CBS85655.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_1000_p_scaffold_220_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17494..18534)
DNA (1041bp) protein (347aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_220_16
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18659..20137)
DNA (1479bp) protein (493aa)
Adenylate cyclase n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7Y8V9_9BACT
Adenylate cyclase {ECO:0000313|EMBL:EMS33631.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
guanylate cyclase
SCNpilot_cont_1000_p_scaffold_220_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20346..20975
DNA (630bp) protein (210aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHG6_CHIPD
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ACU58145.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_220_18
unknown

Not on your lists

comp(20976..21191)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_220_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21355..21807
DNA (453bp) protein (151aa)
Ribosome maturation factor RimP n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W8_NIAKG
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Ribosome maturation factor rimP; K09748 ribosome maturation factor RimP
SCNpilot_cont_1000_p_scaffold_220_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21844..23094
DNA (1251bp) protein (417aa)
NusA antitermination factor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHH1_CHIPD
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_220_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23234..26227
DNA (2994bp) protein (998aa)
translation initiation factor IF-2 n=1 Tax=Niabella aurantiaca RepID=UPI000364B4B8
translation initiation factor 2 (bIF-2); K02519 translation initiation factor IF-2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_220_22
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26303..27763)
DNA (1461bp) protein (487aa)
Fibronectin type III domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID20_FLUTR
Fibronectin type III domain protein {ECO:0000313|EMBL:AEA44414.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Fibronectin type III domain-containing protein
SCNpilot_cont_1000_p_scaffold_220_23
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27937..30027)
DNA (2091bp) protein (697aa)
Fibronectin type III domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID20_FLUTR
Fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:AEA44414.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_cont_1000_p_scaffold_220_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30297..31274)
DNA (978bp) protein (326aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB83_CHIPD rbh
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit rbh
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACU61221.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_220_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31309..32052)
DNA (744bp) protein (248aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB84_CHIPD
electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_220_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32207..32968)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ58_CHIPD
hypothetical protein; K07164
Uncharacterized protein {ECO:0000313|EMBL:ACU64296.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_220_27
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32970..34070)
DNA (1101bp) protein (367aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENQ5_RUNSL rbh
NGG1p interacting factor 3 protein, NIF3 rbh
SCNpilot_cont_1000_p_scaffold_220_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34661..35953
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003811B1A rbh
Outer membrane efflux protein {ECO:0000313|EMBL:EHQ29143.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_1000_p_scaffold_220_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35983..37077
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003600864 rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHQ29144.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
efflux transporter, rnd family, mfp subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_cont_1000_p_scaffold_220_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37110..40244
DNA (3135bp) protein (1045aa)
cation transporter n=1 Tax=Segetibacter koreensis RepID=UPI00036CAC8F rbh
Putative RND-type efflux pump membrane protein {ECO:0000313|EMBL:GAO41646.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family
Displaying items 1-30 of 107 in total

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