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SCNpilot_cont_1000_p_scaffold_309

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_309_1
unknown

Not on your lists

comp(3..203)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_309_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(226..666)
DNA (441bp) protein (147aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI6_NIAKG
CMP/dCMP deaminase zinc-binding protein
SCNpilot_cont_1000_p_scaffold_309_3
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(707..1159)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Bacteroides RepID=B3JG63_9BACE
SCNpilot_cont_1000_p_scaffold_309_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1239..2606
DNA (1368bp) protein (456aa)
tRNA modification GTPase trmE; K03650 tRNA modification GTPase [EC:3.6.-.-] rbh
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
tRNA modification GTPase MnmE n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRX1_NIAKG rbh
SCNpilot_cont_1000_p_scaffold_309_5
unknown

Not on your lists

comp(2640..2969)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_309_6
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3071..4099
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R0N9_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV32743.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
SCNpilot_cont_1000_p_scaffold_309_7
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

4367..5194
DNA (828bp) protein (276aa)
Putative uncharacterized protein id=3827866 bin=GWF2_Bacteroidetes_29_10 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
SCNpilot_cont_1000_p_scaffold_309_8
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5308..6315)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003730ADA
Contig64, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76420.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_309_9
unknown

Not on your lists

6430..6624
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_309_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(6597..9191)
DNA (2595bp) protein (865aa)
Cell surface glycoprotein (S-layer protein) related protein id=2186402 bin=GWB2_Ignavibacteria_35_12 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
cell surface glycoprotein (s-layer protein) related protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_cont_1000_p_scaffold_309_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

9361..10590
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI000288BED7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_309_12
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10601..11194)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003748176
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEE52382.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_1000_p_scaffold_309_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11350..12123
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBW1_NIAKG
ABC transporter permease {ECO:0000313|EMBL:KIC90420.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K02066 putative ABC transport system permease protein
SCNpilot_cont_1000_p_scaffold_309_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12129..12905
DNA (777bp) protein (259aa)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEV98244.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEV98244.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphonate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBW2_NIAKG
phosphonate-transporting ATPase; K02065 putative ABC transport system ATP-binding protein
SCNpilot_cont_1000_p_scaffold_309_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12913..13908
DNA (996bp) protein (332aa)
Mammalian cell entry related domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y9Y4_9SPHI
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EHQ24968.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Mammalian cell entry related domain-containing protein; K02067 putative ABC transport system substrate-binding protein
SCNpilot_cont_1000_p_scaffold_309_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13917..14924
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360FFDB rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC95581.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K09151 hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_309_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14921..16102)
DNA (1182bp) protein (394aa)
phospholipase D/Transphosphatidylase; K06132 putative cardiolipin synthase [EC:2.7.8.-]
Phospholipase D/Transphosphatidylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPX3_NIAKG
Phospholipase {ECO:0000313|EMBL:KIC90418.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_1000_p_scaffold_309_18
unknown

Not on your lists

comp(16089..16241)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_309_19
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16393..17523
DNA (1131bp) protein (377aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Uncharacterized protein {ECO:0000313|EMBL:KGM38635.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
DegT/DnrJ/EryC1/StrS aminotransferase id=3578592 bin=GWC2_Planctomycete_KSU_39_26 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes rbh
SCNpilot_cont_1000_p_scaffold_309_20
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17547..19700
DNA (2154bp) protein (718aa)
Uncharacterized protein id=3651326 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_cont_1000_p_scaffold_309_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

19807..20829
DNA (1023bp) protein (341aa)
beta-ketoacyL-acyL-carrier-protein synthase iii (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-Oxoacyl-(Acyl-carrier-protein (ACP)) synthase III domain protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5S3_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_309_22
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20876..21103
DNA (228bp) protein (76aa)
Putative acyl carrier protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6L9H7_PARD8
acyl carrier protein
Uncharacterized protein {ECO:0000313|EMBL:EIY24240.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
SCNpilot_cont_1000_p_scaffold_309_23
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

21487..22356
DNA (870bp) protein (290aa)
beta-ketoacyl-ACP synthase; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-Oxoacyl-(Acyl-carrier-protein (ACP)) synthase III domain protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5S3_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_309_24
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

22459..23514
DNA (1056bp) protein (352aa)
beta-ketoacyl-acyl-carrier-protein synthase I (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
Beta-ketoacyl-acyl-carrier-protein synthase I id=4125873 bin=GWF2_Bacteroidetes_41_31 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_cont_1000_p_scaffold_309_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

23514..24266
DNA (753bp) protein (251aa)
3-oxoacyl-ACP reductase n=1 Tax=Treponema primitia RepID=UPI0002555561
short chain dehydrogenase/reductase family oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_309_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

24263..25186
DNA (924bp) protein (308aa)
Glycosyltransferase id=3960807 bin=GWF2_Bacteroidetes_38_335 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
glycosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_cont_1000_p_scaffold_309_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25187..25834
DNA (648bp) protein (216aa)
UPI000298871B related cluster id=4125868 bin=GWF2_Bacteroidetes_41_31 species=Vibrio parahaemolyticus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
pseudaminic acid biosynthesis N-acetyl transferase
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_cont_1000_p_scaffold_309_28
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

25831..26541
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037746D1
Putative uncharacterized protein {ECO:0000313|EMBL:EGD76219.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_309_29
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

26569..27297
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2TXW0_SALR5
Putative uncharacterized protein {ECO:0000313|EMBL:EGD76219.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
SCNpilot_cont_1000_p_scaffold_309_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27307..28233)
DNA (927bp) protein (309aa)
sugar kinase n=1 Tax=Segetibacter koreensis RepID=UPI000361A34E rbh
PfkB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 79 in total

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