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SCNpilot_cont_1000_p_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_348_1
unknown

Not on your lists

2..628
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_2
unknown

Not on your lists

671..2197
DNA (1527bp) protein (509aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_3
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2304..3146
DNA (843bp) protein (281aa)
TonB family protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KW47_HALH1
TonB family protein; K03832 periplasmic protein TonB
TonB family protein {ECO:0000313|EMBL:AEE48245.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_1000_p_scaffold_348_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3257..3898)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KT19_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05590.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_348_5
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4194..5267
DNA (1074bp) protein (358aa)
Leucine dehydrogenase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LM62_9BACT rbh
Leucine dehydrogenase {ECO:0000313|EMBL:AKD02889.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
glutamate dehydrogenase/leucine dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_348_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5319..6767)
DNA (1449bp) protein (483aa)
Cell wall hydrolase/autolysin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE94_NIAKG
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEV97285.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_348_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6772..7128)
DNA (357bp) protein (119aa)
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI000363669F
Transcriptional regulator {ECO:0000313|EMBL:AHF14665.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
transcriptional regulator; K07737 putative transcriptional regulator
SCNpilot_cont_1000_p_scaffold_348_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7311..8231
DNA (921bp) protein (307aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV17_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_348_9
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8347..9915
DNA (1569bp) protein (523aa)
urocanate hydratase (EC:4.2.1.49) rbh
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
Urocanate hydratase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AID6_FLELS rbh
SCNpilot_cont_1000_p_scaffold_348_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10005..10484
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (s
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY5_CHIPD
SCNpilot_cont_1000_p_scaffold_348_11
unknown

Not on your lists

10481..10831
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_12
unknown

Not on your lists

10862..11206
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_13
unknown

Not on your lists

comp(11260..11559)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11585..11752)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Sphingobacterium paucimobilis RepID=UPI0003B44CD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96352.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_1000_p_scaffold_348_15
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11912..12658
DNA (747bp) protein (249aa)
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KGE86315.1}; EC=1.1.1.36 {ECO:0000313|EMBL:KGE86315.1};; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) rbh
Acetoacetyl-CoA reductase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZL08_9BACT rbh
SCNpilot_cont_1000_p_scaffold_348_16
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12739..14040
DNA (1302bp) protein (434aa)
Uncharacterized protein id=3825719 bin=GWF2_Bacteroidetes_33_16 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_cont_1000_p_scaffold_348_17
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14059..14817)
DNA (759bp) protein (253aa)
dienelactone hydrolase-like protein; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Dienelactone hydrolase-related protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11WE2_CYTH3
Dienelactone hydrolase-related protein {ECO:0000313|EMBL:ABG58274.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_cont_1000_p_scaffold_348_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15086..16807
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSR1_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU64510.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_348_19
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16824..18404
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6FF13 rbh
Uncharacterized protein {ECO:0000313|EMBL:AII51764.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_348_20
unknown

Not on your lists

18510..18887
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_21
unknown

Not on your lists

18968..19486
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_22
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19667..20014
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6STS1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27820.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
HTH_3 family transcriptional regulator protein
SCNpilot_cont_1000_p_scaffold_348_23
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20062..22368)
DNA (2307bp) protein (769aa)
Outer membrane receptor protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K0I7_9BACT rbh
Outer membrane receptor protein {ECO:0000313|EMBL:ELR72992.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
TonB-dependent receptor
SCNpilot_cont_1000_p_scaffold_348_24
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22381..23040)
DNA (660bp) protein (220aa)
membrane protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B5AB36
Uncharacterized protein {ECO:0000313|EMBL:AHJ99161.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_348_25
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23048..24397)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B7518E
Uncharacterized protein {ECO:0000313|EMBL:AHJ99162.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_348_26
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24498..26546)
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037B0E52 rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_cont_1000_p_scaffold_348_27
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26576..28324)
DNA (1749bp) protein (583aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000372A98B rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_cont_1000_p_scaffold_348_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28568..29362)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV0_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC96045.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_348_29
unknown

Not on your lists

29481..29732
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_348_30
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

29994..34640
DNA (4647bp) protein (1549aa)
Uncharacterized protein n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GX31_DEIGI
hypothetical protein; K07004
Uncharacterized protein {ECO:0000313|EMBL:AFD24571.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
Displaying items 1-30 of 70 in total

View Taxonomy