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SCNpilot_cont_1000_p_scaffold_479

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_479_31
unknown

Not on your lists

31831..31977
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_479_32
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31922..33358
DNA (1437bp) protein (479aa)
Integral membrane sensor signal transduction histidine kinase id=4498312 bin=GWF2_Bacteroidetes_41_31 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
histidine kinase
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_cont_1000_p_scaffold_479_33
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33355..34053
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family id=4202287 bin=GWF2_Bacteroidetes_49_14 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
winged helix family two component transcriptional regulator
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_cont_1000_p_scaffold_479_34
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34056..35129)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000362B798
Outer membrane protein Omp28
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_cont_1000_p_scaffold_479_35
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35461..51558)
DNA (16098bp) protein (5366aa)
FG-GAP repeat protein id=3748578 bin=GWF2_Bacteroidetes_35_48 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_cont_1000_p_scaffold_479_36
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

Not on your lists

comp(51948..52991)
DNA (1044bp) protein (348aa)
cytochrome-c peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5] rbh
Cytochrome C peroxidase n=1 Tax=unidentified eubacterium SCB49 RepID=A6EU65_9BACT rbh
Cytochrome C peroxidase {ECO:0000313|EMBL:EDM42875.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
SCNpilot_cont_1000_p_scaffold_479_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52988..53734)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCA9_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59492.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_479_38
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53747..54271)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y500_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28328.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_479_39
unknown

Not on your lists

comp(54283..54591)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_479_40
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54612..55220)
DNA (609bp) protein (203aa)
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8S8_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_479_41
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55443..56180)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFZ4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57977.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_479_42
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

56328..56765
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPK4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57851.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_479_43
unknown

Not on your lists

comp(57012..57251)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_479_44
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57193..57912)
DNA (720bp) protein (240aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
tRNA (adenine-N6)-methyltransferase n=1 Tax=Serratia marcescens RepID=UPI00037286A9
yfiC; tRNA (adenine-N(6)-)-methyltransferase
SCNpilot_cont_1000_p_scaffold_479_45
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(57909..58925)
DNA (1017bp) protein (339aa)
glycoprotease family metalloendopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingoba
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D1ACB
SCNpilot_cont_1000_p_scaffold_479_46
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

59126..59761
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003776397
Uncharacterized protein {ECO:0000313|EMBL:AKD54710.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_1000_p_scaffold_479_47
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

59860..60747
DNA (888bp) protein (296aa)
Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7TCC9_NEMVE
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EDO26304.1}; Flags: Fragment;; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_cont_1000_p_scaffold_479_48
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60827..61660)
DNA (834bp) protein (278aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PER1_CHIPD
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_479_49
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61851..62873)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PER2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57884.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_479_50
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(62900..63970)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD96_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57719.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_479_51
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64063..64896
DNA (834bp) protein (278aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO28251.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
SCNpilot_cont_1000_p_scaffold_479_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

64975..66657
DNA (1683bp) protein (561aa)
NH(3)-dependent NAD(+) synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NH(3)-dependent NAD(+) synthetase {ECO:0000313|EMBL:AEW01912.1}; EC=6.3.1.5 {ECO:0000313|EMBL:AEW01912.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NH(3)-dependent NAD(+) synthetase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL71_NIAKG
SCNpilot_cont_1000_p_scaffold_479_53
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

66661..67134
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=A8ZN28_ACAM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW32227.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
SCNpilot_cont_1000_p_scaffold_479_54
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(67136..67597)
DNA (462bp) protein (154aa)
Putative small integral membrane protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMQ0_SOLCM
putative small integral membrane protein
Putative small integral membrane protein {ECO:0000313|EMBL:AFD09041.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_479_55
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(67717..70704)
DNA (2988bp) protein (996aa)
Gliding motility-related protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L824_SAPGL
adhesin AidA-related protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_479_56
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(70945..73917)
DNA (2973bp) protein (991aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Y6_NIAKG
PKD domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_479_57
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(74019..75038)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037FCC9D
Putative glycosyltransferase {ECO:0000313|EMBL:GAO42925.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
glycosyl transferase family protein
SCNpilot_cont_1000_p_scaffold_479_58
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(75070..76092)
DNA (1023bp) protein (341aa)
Peptidoglycan-binding LysM n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKY1_CHIPD
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ACU63891.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_479_59
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76131..77465)
DNA (1335bp) protein (445aa)
RNA methyltransferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6DD13
Uncharacterized protein {ECO:0000313|EMBL:KIC93172.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Fmu (Sun) domain-containing protein
SCNpilot_cont_1000_p_scaffold_479_60
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77501..78850)
DNA (1350bp) protein (450aa)
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Adenylosuccinate lyase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ8_CHIPD rbh
Displaying items 31-60 of 62 in total

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