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SCNpilot_cont_1000_p_scaffold_479_40

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(54612..55220)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8S8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 191.0
  • Bit_score: 202
  • Evalue 4.50e-49
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 191.0
  • Bit_score: 202
  • Evalue 1.40e-49
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 191.0
  • Bit_score: 202
  • Evalue 6.30e-49

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGCTAATATTACATTTACAAAAGATGCCGGAGCATATCATAGAACGGTTAAAGGCAGGTGAGGAGGCCGCTTTCAGGGAACTGGTGGATACACAGCAGCAAAGGATACTGAATGTGGCGCTGGGCCTTGTACAAAGTCATGAGCTGGCGGAGGACATAACACAAGAGGTTTTTATAGAAGTTTTCAGGTCGGTAGGCAAGTTCAGCGGTCAATCGACATTATCTACCTGGATATACCGTATAACGGTCAATAAATGTCTTGATGCACTCCGGTATCAAAAAAGAGGTAAGCGTTTTGCTTTTATCACCAGCCTCTTCAGGCCCGATACCGGGGAGCTGAAATACGAATCTGCTCATTTTGATCATCCCGGCGTGGCACTGGAAAAGAAGGAAAATGCAAGAATGCTATTTGCCGCAATTGACGAACTACCCGAAAACCAGAAGGTTGCTTTTATCTTATCGCAGGTAGAGGAAGTGCCACAGAAAGACATAGCATTAATAATGAATATTTCAATAAAGGCCGTTGAGTCGCTGATACAGCGGGCGAAAAGTAACCTGAGAAAAAAGCTTGAAAATATTTATATCAAACGAAGGAAGCACGACAGTTGA
PROTEIN sequence
Length: 203
MLILHLQKMPEHIIERLKAGEEAAFRELVDTQQQRILNVALGLVQSHELAEDITQEVFIEVFRSVGKFSGQSTLSTWIYRITVNKCLDALRYQKRGKRFAFITSLFRPDTGELKYESAHFDHPGVALEKKENARMLFAAIDELPENQKVAFILSQVEEVPQKDIALIMNISIKAVESLIQRAKSNLRKKLENIYIKRRKHDS*