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SCNpilot_cont_1000_p_scaffold_511

Search features with annotation key words

Displaying items 31-55 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_511_31
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31329..31973
DNA (645bp) protein (215aa)
dethiobiotin synthase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3]
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003648578
SCNpilot_cont_1000_p_scaffold_511_32
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31960..33234
DNA (1275bp) protein (425aa)
Adenosylmethionine-8-amino-7-oxononanoateaminotra nsferase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K3X9_9BACT rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:ETZ21546.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
adenosylmethionine-8-amino-7-oxononanoateaminotransferase rbh
SCNpilot_cont_1000_p_scaffold_511_33
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33247..33903
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQY7_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD07133.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_511_34
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33908..35500)
DNA (1593bp) protein (531aa)
peptide chain release factor 3 n=1 Tax=Segetibacter koreensis RepID=UPI00036D79B0
peptide chain release factor 3 (bRF-3); K02837 peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_511_35
unknown

Not on your lists

35662..36213
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_511_36
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36245..38194
DNA (1950bp) protein (650aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJF9_9SPHI
SCNpilot_cont_1000_p_scaffold_511_37
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(38199..40511)
DNA (2313bp) protein (771aa)
FG-GAP repeat protein id=2063530 bin=GWE2_Bacteroidetes_42_42 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
PKD domain-containing protein
Tax=GWF2_Bacteroidetes_43_63_curated
SCNpilot_cont_1000_p_scaffold_511_38
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40806..42047
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362E168 rbh
MFS transporter {ECO:0000313|EMBL:AIZ62648.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
permease; K08151 MFS transporter, DHA1 family, tetracycline resistance protein rbh
SCNpilot_cont_1000_p_scaffold_511_39
GWE2_OD1_45_35, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

42064..44226
DNA (2163bp) protein (721aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-) rbh
ATP-dependent DNA helicase RecQ n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YIT7_9SPHI
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KKU05526.1}; TaxID=1618993 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWE2_45_35.;"
SCNpilot_cont_1000_p_scaffold_511_40
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44246..45391)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB17_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42100.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_cont_1000_p_scaffold_511_41
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(45378..45728)
DNA (351bp) protein (117aa)
Transcriptional regulator, PadR family n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TM16_MARTH
transcriptional regulator, padr family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ADR20307.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
SCNpilot_cont_1000_p_scaffold_511_42
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45845..47377)
DNA (1533bp) protein (511aa)
L-aminoadipate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AEV97886.1}; EC=1.2.1.31 {ECO:0000313|EMBL:AEV97886.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L-aminoadipate-semialdehyde dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQY7_NIAKG rbh
L-aminoadipate-semialdehyde dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_511_43
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47466..48002)
DNA (537bp) protein (179aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
CDP-3, 6-dideoxy-D-glycero-D-glycero-4-hexulose-5-epimerase n=1 Tax=Yersinia pseudotuberculosis RepID=Q57502_YERPU
CDP-3, 6-dideoxy-D-glycero-D-glycero-4-hexulose-5-epimerase {ECO:0000313|EMBL:AAA88702.1}; TaxID=633 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis.;"
SCNpilot_cont_1000_p_scaffold_511_44
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(48002..49114)
DNA (1113bp) protein (371aa)
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] rbh
CDP-glucose 4,6-dehydratase n=1 Tax=Pontibacter roseus RepID=UPI00037DDC06 rbh
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:EJF08818.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
SCNpilot_cont_1000_p_scaffold_511_45
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

comp(49081..49854)
DNA (774bp) protein (258aa)
rfbF; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
glucose-1-phosphate cytidylyltransferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B3F2EA
Tax=GWA2_Elusimicrobia_62_23_curated
SCNpilot_cont_1000_p_scaffold_511_46
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

50015..50542
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F16CE
Bifunctional deaminase-reductase domain-containing protein {ECO:0000313|EMBL:AHM63511.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
bifunctional deaminase-reductase domain-containing protein
SCNpilot_cont_1000_p_scaffold_511_47
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(50552..51190)
DNA (639bp) protein (213aa)
NUDIX hydrolase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EP98_EMTOG
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AFK01501.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_1000_p_scaffold_511_48
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

51224..51859
DNA (636bp) protein (212aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003605EE8
SCNpilot_cont_1000_p_scaffold_511_49
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51849..52727)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB33_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59405.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_511_50
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52756..53448)
DNA (693bp) protein (231aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSY8_CHIPD
SCNpilot_cont_1000_p_scaffold_511_51
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53492..53851
DNA (360bp) protein (120aa)
Secreted protein n=1 Tax=Alistipes sp. CAG:435 RepID=R6XG05_9BACT
Secreted protein {ECO:0000313|EMBL:CDD15276.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
secreted protein
SCNpilot_cont_1000_p_scaffold_511_52
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53997..55952
DNA (1956bp) protein (652aa)
Uncharacterized protein id=4341795 bin=GWF2_Bacteroidetes_49_14 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
peptidase S41
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_cont_1000_p_scaffold_511_53
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

56122..56772
DNA (651bp) protein (217aa)
iron-dependent repressor n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4C35A
Uncharacterized protein {ECO:0000313|EMBL:KEQ30259.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
SCNpilot_cont_1000_p_scaffold_511_54
RLO_PLX_64_10, Bacteria

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comp(56781..58052)
DNA (1272bp) protein (424aa)
Putative L-cysteine/cystine lyase n=1 Tax=Algoriphagus machipongonensis RepID=A3I0R9_9BACT rbh
putative aminotransferase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_1000_p_scaffold_511_55
unknown

Not on your lists

comp(58167..58856)
DNA (690bp) protein (230aa)

This feature has no annotations

Displaying items 31-55 of 55 in total

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