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SCNpilot_cont_1000_p_scaffold_511

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_511_1
unknown

Not on your lists

comp(242..409)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_511_2
unknown

Not on your lists

comp(483..689)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_511_3
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1230..2159
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQR3_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:EWH10100.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_511_4
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2170..2415
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XA69_FLACA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW85927.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
SCNpilot_cont_1000_p_scaffold_511_5
unknown

Not on your lists

comp(2523..2810)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_511_6
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2840..4156)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20429 RepID=G7F4V3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIX21586.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_511_7
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4427..5941
DNA (1515bp) protein (505aa)
Site-specific recombinase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S8I3_HAHCH
site-specific recombinase
Tax=BJP_IG2069_Syntrophobacterales_46_30
SCNpilot_cont_1000_p_scaffold_511_8
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5850..7817)
DNA (1968bp) protein (656aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003713BC9
regulator of chromosome condensation, RCC1
Tax=GWA2_Bacteroidetes_30_7_curated
SCNpilot_cont_1000_p_scaffold_511_9
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7928..8413)
DNA (486bp) protein (162aa)
Acetyltransferase, N-acetylglutamate synthase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FVN7_ECHVK
acetyltransferase, N-acetylglutamate synthase
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:AGA77372.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
SCNpilot_cont_1000_p_scaffold_511_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8462..9058)
DNA (597bp) protein (199aa)
Regulatory protein TetR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB75_NIAKG
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AEW02458.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_511_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9292..9654
DNA (363bp) protein (121aa)
Transcriptional regulator, PadR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF30_NIAKG
PadR family transcriptional regulator {ECO:0000313|EMBL:KIC96363.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
transcriptional regulator, PadR family
SCNpilot_cont_1000_p_scaffold_511_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9676..11487
DNA (1812bp) protein (604aa)
Phage shock protein C, PspC n=1 Tax=Niabella soli DSM 19437 RepID=H1NTI4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17850.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phage shock protein C, PspC
SCNpilot_cont_1000_p_scaffold_511_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11468..11953
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSU8_SOLCM
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_511_14
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12105..14339
DNA (2235bp) protein (745aa)
sodium:proton antiporter n=1 Tax=Pontibacter roseus RepID=UPI0003678939 rbh
Kef-type K+ transport system membrane protein rbh
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:AFD05475.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_511_15
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14411..16078)
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Formate--tetrahydrofolate ligase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNN2_SOLCM rbh
formyltetrahydrofolate synthetase rbh
SCNpilot_cont_1000_p_scaffold_511_16
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16636..17085
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZTC5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY26347.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
SCNpilot_cont_1000_p_scaffold_511_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

17132..19939
DNA (2808bp) protein (936aa)
BNR/Asp-box repeat domain protein id=3854585 bin=GWF2_Bacteroidetes_38_335 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_511_18
Leptospira vanthielii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20042..20224
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1W2J8_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EMY70459.1}; TaxID=1218591 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_511_19
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20352..22208
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000380C735
Uncharacterized protein {ECO:0000313|EMBL:KGE89658.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
PKD domain-containing protein
SCNpilot_cont_1000_p_scaffold_511_20
unknown

Not on your lists

22279..23082
DNA (804bp) protein (268aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_511_21
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

23221..23991
DNA (771bp) protein (257aa)
DNA/RNA non-specific endonuclease n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QTR6_CHLT3
DNA/RNA non-specific endonuclease; K01173 endonuclease G, mitochondrial
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:ACF14264.1}; Flags: Precursor;; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
SCNpilot_cont_1000_p_scaffold_511_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24129..24386
DNA (258bp) protein (86aa)
Acyl-carrier protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ08_CHIPD
Acyl carrier protein {ECO:0000313|EMBL:KIC95647.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
acyl-carrier protein; K02078 acyl carrier protein
SCNpilot_cont_1000_p_scaffold_511_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24400..25605
DNA (1206bp) protein (402aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] rbh
Beta-ketoacyl synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ07_CHIPD rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:ACU64245.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_511_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25602..26669
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ06_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU64244.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_511_25
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26689..27486)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036047F9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG57637.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_cont_1000_p_scaffold_511_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27487..28035)
DNA (549bp) protein (183aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB29_CHIPD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_511_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28065..28643)
DNA (579bp) protein (193aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Peptide deformylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB28_CHIPD
SCNpilot_cont_1000_p_scaffold_511_28

Not on your lists

comp(28687..29187)
DNA (501bp) protein (167aa)
Holliday junction resolvase; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Holliday junction resolvase n=1 Tax=Niabella aurantiaca RepID=UPI0003716BB9
Marine sediment metagenome DNA, contig: S03H2_S12980 {ECO:0000313|EMBL:GAH66661.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_1000_p_scaffold_511_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29223..30200
DNA (978bp) protein (326aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Biotin synthase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1R8_9SPHI
biotin synthetase
SCNpilot_cont_1000_p_scaffold_511_30
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30212..31336
DNA (1125bp) protein (375aa)
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:CCH56313.1}; EC=2.3.1.47 {ECO:0000313|EMBL:CCH56313.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
8-amino-7-oxononanoate synthase (EC:2.3.1.47) rbh
8-amino-7-oxononanoate synthase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GQY5_9BACT rbh
Displaying items 1-30 of 55 in total

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