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SCNpilot_cont_1000_p_scaffold_575

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_575_31
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29003..29998
DNA (996bp) protein (332aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] rbh
LAO/AO transport system ATPase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG27_CHIPD rbh
LAO/AO transport system ATPase {ECO:0000313|EMBL:ACU58010.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_575_32
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30021..31619
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:189 RepID=R5JJK3_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH72300.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
prenyltransferase and squalene oxidase rbh
SCNpilot_cont_1000_p_scaffold_575_33
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31609..32700
DNA (1092bp) protein (364aa)
UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ADZ78390.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ADZ78390.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C963_SPHS2
SCNpilot_cont_1000_p_scaffold_575_34
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32922..34160
DNA (1239bp) protein (413aa)
Glycosyl transferase family 4 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C871_SPHS2
glycosyl transferase
Glycosyl transferase family 4 {ECO:0000313|EMBL:ADZ78343.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_1000_p_scaffold_575_35
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34176..35486)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ18_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64256.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_575_36
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35498..37036)
DNA (1539bp) protein (513aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] rbh
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ17_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_575_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37054..37374)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ39_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64277.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_575_38
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37499..38104
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02018.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_575_39
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38348..38890
DNA (543bp) protein (181aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CKW0_9FLAO
GNAT family acetyltransferase {ECO:0000313|EMBL:KJS06757.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
N-acetyltransferase GCN5
SCNpilot_cont_1000_p_scaffold_575_40
unknown

Not on your lists

39018..39851
DNA (834bp) protein (278aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_575_41
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(39925..42195)
DNA (2271bp) protein (757aa)
catalase/peroxidase HPI; K03782 catalase-peroxidase [EC:1.11.1.21] rbh
Catalase-peroxidase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QD54_SPILD rbh
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
SCNpilot_cont_1000_p_scaffold_575_42
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(42384..43847)
DNA (1464bp) protein (488aa)
pepD; Xaa-His dipeptidase (EC:3.4.13.-) rbh
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000367D341 rbh
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:AKD03947.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCNpilot_cont_1000_p_scaffold_575_43
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(43912..44349)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5D6_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKG52715.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_575_44
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(44403..44756)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00035CA1D9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL82939.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
SCNpilot_cont_1000_p_scaffold_575_45
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

44912..46786
DNA (1875bp) protein (625aa)
adenylate/guanylate cyclase (EC:4.6.1.2)
Family 3 adenylate cyclase id=4368875 bin=GWF2_Ignavibacteria_33_9 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=GWF2_RIF_IGX_33_9_curated
SCNpilot_cont_1000_p_scaffold_575_46
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46802..48547)
DNA (1746bp) protein (582aa)
ASPIC/UnbV domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQQ0_HALH1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH74642.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
ASPIC/UnbV domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_575_47
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(48694..49677)
DNA (984bp) protein (328aa)
Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QN85_SPILD rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB39274.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_575_48
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49813..50247
DNA (435bp) protein (145aa)
PhnB protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H5X9_9SPHI
Contig59, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76586.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_575_49
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50260..50832
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMS5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58619.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_575_50
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

50902..51261
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000361B1B5
Uncharacterized protein {ECO:0000313|EMBL:KIF31534.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
ArsR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_575_51
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

51245..52231
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC7_9BACT
Activator of Hsp90 ATPase 1 family protein
Tax=RBG_13_Acidobacteria_68_16_curated
SCNpilot_cont_1000_p_scaffold_575_52
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

52308..52712
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EI12_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50757.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_1000_p_scaffold_575_53
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

52728..52934
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBV9_FLAJ1
Strain DSM 12611 Contig02, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54717.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_575_54
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

53013..54410
DNA (1398bp) protein (466aa)
MATE efflux family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB76_NIAKG
MATE efflux family protein {ECO:0000313|EMBL:GAL85889.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
MATE efflux family protein
SCNpilot_cont_1000_p_scaffold_575_55
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54414..55613)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKD2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM34045.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_575_56
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55756..56322)
DNA (567bp) protein (189aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037270CA
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:AEV98627.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_575_57
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56357..57136)
DNA (780bp) protein (260aa)
Putative MerR-family transcriptional regulator n=1 Tax=Kordia algicida OT-1 RepID=A9DLG7_9FLAO
Putative MerR-family transcriptional regulator {ECO:0000313|EMBL:EDP98563.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
type 11 methyltransferase
SCNpilot_cont_1000_p_scaffold_575_58
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57234..58187)
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y456_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05499.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_p_scaffold_575_59
unknown

Not on your lists

58559..58777
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_575_60
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58895..60973
DNA (2079bp) protein (693aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDK2_9SPHI
multi-sensor signal transduction histidine kinase rbh
Displaying items 31-60 of 63 in total

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