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SCNpilot_cont_1000_p_scaffold_575

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_575_1
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2..424
DNA (423bp) protein (141aa)
Glycine cleavage system H protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0E5_9FLAO
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
gcvH; glycine cleavage complex lipoylprotein
SCNpilot_cont_1000_p_scaffold_575_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

432..1463
DNA (1032bp) protein (344aa)
Arsenical-resistance protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Y3_9FLAO rbh
Arsenical-resistance protein {ECO:0000313|EMBL:EFK35894.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family rbh
SCNpilot_cont_1000_p_scaffold_575_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1555..1821
DNA (267bp) protein (89aa)
Bleomycin resistance protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G220_9SPHI
Bleomycin resistance protein {ECO:0000313|EMBL:EEI90710.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
SCNpilot_cont_1000_p_scaffold_575_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2054..2419
DNA (366bp) protein (122aa)
Transcriptional regulator, ArsR family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G219_9SPHI
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEI90709.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
ArsR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_575_5
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2425..2913
DNA (489bp) protein (163aa)
Heavy metal-associated domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G218_9SPHI rbh
Heavy metal-associated domain protein {ECO:0000313|EMBL:EEI90708.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
heavy metal transport/detoxification protein
SCNpilot_cont_1000_p_scaffold_575_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3121..4002)
DNA (882bp) protein (294aa)
Putative phage tail component domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G216_9SPHI rbh
Putative phage tail component domain protein {ECO:0000313|EMBL:EEI90706.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
KilA-N, DNA-binding domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_575_7
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3992..6085)
DNA (2094bp) protein (698aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2] rbh
DNA topoisomerase III n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q2_PEDSD rbh
DNA topoisomerase III {ECO:0000313|EMBL:ADY52162.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_1000_p_scaffold_575_8
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6092..7552)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G214_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EEI90704.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_575_9
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7637..7945)
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F0S6Q4_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAE64111.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
SCNpilot_cont_1000_p_scaffold_575_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7958..8311)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q5_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52165.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_1000_p_scaffold_575_11
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8561..9406)
DNA (846bp) protein (282aa)
RteC protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G211_9SPHI rbh
RteC protein {ECO:0000313|EMBL:EEI90701.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
Tetracycline regulation of excision, RteC rbh
SCNpilot_cont_1000_p_scaffold_575_12
unknown

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comp(9354..9512)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_575_13
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9637..9834
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q7_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52167.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_1000_p_scaffold_575_14
unknown

Not on your lists

comp(9862..10011)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_575_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

10061..12043
DNA (1983bp) protein (661aa)
hypothetical protein AagaZ_16588 id=3113026 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_575_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12086..13705)
DNA (1620bp) protein (540aa)
Glycosyl transferase family 39 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD0_CHIPD rbh
glycosyl transferase family protein rbh
Glycosyl transferase family 39 {ECO:0000313|EMBL:ACU58819.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_575_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13705..14367)
DNA (663bp) protein (221aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2Y6_9SPHI
PA-phosphatase-like phosphoesterase
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EHQ28531.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_575_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14367..15830)
DNA (1464bp) protein (488aa)
Permease YjgP/YjgQ family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD2_CHIPD rbh
YjgP/YjgQ family permease rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO41540.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_cont_1000_p_scaffold_575_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16016..16399)
DNA (384bp) protein (128aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD4_CHIPD
ATPase {ECO:0000313|EMBL:KIC95337.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_1000_p_scaffold_575_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16665..17540
DNA (876bp) protein (292aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD5_CHIPD rbh
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor rbh
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:ACU58824.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_575_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17727..18248
DNA (522bp) protein (174aa)
NLP/P60 protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHS1_CHIPD
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACU60007.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_575_22
unknown

Not on your lists

comp(18757..19101)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_575_23
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(19113..19895)
DNA (783bp) protein (261aa)
Uncharacterized protein id=1980994 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
SCNpilot_cont_1000_p_scaffold_575_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19895..22726)
DNA (2832bp) protein (944aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
UvrD/REP helicase id=4327377 bin=GWF2_Bacteroidetes_40_13 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_cont_1000_p_scaffold_575_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22729..23988)
DNA (1260bp) protein (420aa)
Adenine-specific DNA methylase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W380_DYAFD rbh
adenine-specific DNA methylase rbh
Adenine-specific DNA methylase {ECO:0000313|EMBL:ACT92184.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_1000_p_scaffold_575_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24435..25025)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG22_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58005.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_575_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25018..26313)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644115
Uncharacterized protein {ECO:0000313|EMBL:KIC91174.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_575_28
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(26294..27037)
DNA (744bp) protein (248aa)
Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A8DWQ6_NEMVE
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EDO25354.1}; Flags: Fragment;; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_cont_1000_p_scaffold_575_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27124..27768)
DNA (645bp) protein (215aa)
Peptidase S16 lon domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG23_CHIPD
Peptidase S16 {ECO:0000313|EMBL:KIC95158.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase S16 lon domain-containing protein; K07157
SCNpilot_cont_1000_p_scaffold_575_30
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(27785..28957)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00035CB286
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Displaying items 1-30 of 63 in total

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