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SCNpilot_cont_1000_p_scaffold_669

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_669_1
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(394..1455)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380CFC3 rbh
UPF0176 protein SM39_1355 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
yceA; putative rhodanese-related sulfurtransferase
SCNpilot_cont_1000_p_scaffold_669_2
unknown

Not on your lists

1553..1948
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_669_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2407..4671)
DNA (2265bp) protein (755aa)
aconitase; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitase {ECO:0000313|EMBL:AEW00740.1}; EC=4.2.1.3 {ECO:0000313|EMBL:AEW00740.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aconitase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ3_NIAKG
SCNpilot_cont_1000_p_scaffold_669_4
unknown

Not on your lists

4748..4843
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_669_5
unknown

Not on your lists

4900..5442
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_669_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5517..6953)
DNA (1437bp) protein (479aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] rbh
Glutamate dehydrogenase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VRS5_9SPHI rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
SCNpilot_cont_1000_p_scaffold_669_7
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6998..7207)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000381E432
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06006.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_669_8
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7212..7892)
DNA (681bp) protein (227aa)
ABC transporter permease n=1 Tax=Pontibacter roseus RepID=UPI000364D3B2
ABC transporter permease {ECO:0000313|EMBL:AKD03042.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
cytochrome C assembly protein; K02195 heme exporter protein C
SCNpilot_cont_1000_p_scaffold_669_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8056..10194)
DNA (2139bp) protein (713aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D1126 rbh
Elongation factor G {ECO:0000313|EMBL:KIC93896.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor G
SCNpilot_cont_1000_p_scaffold_669_10
unknown

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comp(10366..10923)
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_669_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11012..15184)
DNA (4173bp) protein (1391aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUZ8_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD07698.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_669_12
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15425..16165
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD38401.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
SCNpilot_cont_1000_p_scaffold_669_13
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16158..17342
DNA (1185bp) protein (395aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD38400.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
SCNpilot_cont_1000_p_scaffold_669_14
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17372..17989
DNA (618bp) protein (206aa)
Por secretion system C-terminal sorting domain containing protein id=2837093 bin=GWF1_Flavobacteria_32_7 species=Chryseobacterium sp. CF314 genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
CotH protein
Tax=GWF1_Flavobacteria_32_7_curated
SCNpilot_cont_1000_p_scaffold_669_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18030..19949
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB14_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW01361.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_669_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20030..21037)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGN2_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25418.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
putative extracellular nuclease; K07004
SCNpilot_cont_1000_p_scaffold_669_17
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21182..22552)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YVH4_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ38480.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_669_18
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22582..25401)
DNA (2820bp) protein (940aa)
TonB-dependent receptor n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4N9_HALH1 rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:AEE52987.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_1000_p_scaffold_669_19
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25563..26609
DNA (1047bp) protein (349aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6LAT6_SAPGL rbh
endonuclease/exonuclease/phosphatase family protein rbh
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:AFC25679.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
SCNpilot_cont_1000_p_scaffold_669_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26680..27216)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000349D7B4
Uncharacterized protein {ECO:0000313|EMBL:AKD03654.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_669_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27242..27697)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367F190
transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_669_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27820..29118)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000370DA96
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB37526.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_669_23
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29480..39301
DNA (9822bp) protein (3274aa)
FG-GAP repeat protein id=3748578 bin=GWF2_Bacteroidetes_35_48 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
hypothetical protein rbh
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_cont_1000_p_scaffold_669_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39479..39892)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THT6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98531.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_669_25
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40025..41803
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KM50_SOLCM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFD08972.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_669_26
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

41803..42801
DNA (999bp) protein (333aa)
Arginase/agmatinase/formiminoglutamase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERX7_EMTOG rbh
Arginase/agmatinase/formiminoglutamase rbh
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:AFK02430.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_1000_p_scaffold_669_27
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42968..44347
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I950_FLUTR
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_cont_1000_p_scaffold_669_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44393..45709)
DNA (1317bp) protein (439aa)
albXV; carbamoyltransferase;albicidin synthetase (EC:2.-.-.-); K00612 carbamoyltransferase [EC:2.1.3.-]
Carbamoyltransferase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y3Y0_9SPHI
Carbamoyltransferase {ECO:0000313|EMBL:EHQ30925.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Displaying 28 items

View Taxonomy