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SCNpilot_cont_1000_p_scaffold_717

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_717_1
unknown

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3..194
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_717_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(512..2629)
DNA (2118bp) protein (706aa)
Ferrous iron transport protein B n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJU1_CHIPD rbh
ferrous iron transport protein B; K04759 ferrous iron transport protein B rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:ACU58282.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_717_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2793..3260)
DNA (468bp) protein (156aa)
Pfpi family intracellular protease; K05520 protease I [EC:3.2.-.-]
Intracellular protease, PfpI family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y9H8_9SPHI
Intracellular protease, PfpI family {ECO:0000313|EMBL:EHQ29983.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_717_4
unknown

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3393..3893
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_717_5
unknown

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comp(3906..4217)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI000361F556
SCNpilot_cont_1000_p_scaffold_717_6
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4350..4766
DNA (417bp) protein (139aa)
Endoribonuclease L-PSP; K15067 2-aminomuconate deaminase [EC:3.5.99.5]
Endoribonuclease L-PSP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBD8_FLUTR
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEA43224.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_cont_1000_p_scaffold_717_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4802..6190
DNA (1389bp) protein (463aa)
deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:AEW02722.1}; EC=3.1.5.1 {ECO:0000313|EMBL:AEW02722.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG83_NIAKG
SCNpilot_cont_1000_p_scaffold_717_8
unknown

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comp(6196..6984)
DNA (789bp) protein (263aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_717_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7049..8278
DNA (1230bp) protein (410aa)
Queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003752AE5
SCNpilot_cont_1000_p_scaffold_717_10
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8341..9183
DNA (843bp) protein (281aa)
Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74517.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KIO74517.1};; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT54_9SPHI
SCNpilot_cont_1000_p_scaffold_717_11
CG_Bacteroid_01, Bacteroidetes, Bacteria

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9176..10054
DNA (879bp) protein (293aa)
Diacylglycerol kinase catalytic region n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFY7_CHIPD
diacylglycerol kinase catalytic subunit; K07029
Tax=CG_Bacteroid_01
SCNpilot_cont_1000_p_scaffold_717_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10086..11096
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWP9_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08228.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_717_13
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11062..13503
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWP8_SOLCM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFD08227.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_717_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13514..14152)
DNA (639bp) protein (213aa)
carbonate dehydratase; K01673 carbonic anhydrase [EC:4.2.1.1] rbh
Carbonate dehydratase {ECO:0000313|EMBL:ACU63934.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ACU63934.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Carbonate dehydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL24_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_717_15
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

14316..16583
DNA (2268bp) protein (756aa)
Gingipain R (EC:3.4.22.37) rbh
Putative Gingipain R id=4063837 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Tax=CG_Bacteroid_02
SCNpilot_cont_1000_p_scaffold_717_16
unknown

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16689..16865
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_717_17
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(17058..17984)
DNA (927bp) protein (309aa)
OmpA/MotB domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBY8_RUNSL
OmpA/MotB domain-containing protein
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_cont_1000_p_scaffold_717_18
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(18092..19027)
DNA (936bp) protein (312aa)
OmpA/MotB domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBY8_RUNSL
OmpA/MotB domain-containing protein
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_cont_1000_p_scaffold_717_19
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19120..20232)
DNA (1113bp) protein (371aa)
Lipolytic protein G-D-S-L family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCK8_9SPHI
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:EHQ30686.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_717_20
unknown

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comp(20365..21621)
DNA (1257bp) protein (419aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_717_21
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21602..22180)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JD56_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDE61686.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_717_22
unknown

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comp(22265..22396)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_717_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22818..27347
DNA (4530bp) protein (1510aa)
CHU large protein; uncharacterized id=2027507 bin=GWE2_Bacteroidetes_42_42 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
NHL repeat containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_cont_1000_p_scaffold_717_24
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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27694..32211
DNA (4518bp) protein (1506aa)
CHU large protein; uncharacterized id=4380903 bin=GWF2_Bacteroidetes_43_63 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
NHL repeat containing protein
Tax=GWF2_Bacteroidetes_43_63_curated
SCNpilot_cont_1000_p_scaffold_717_25
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

32587..37116
DNA (4530bp) protein (1510aa)
CHU large protein; uncharacterized id=2027507 bin=GWE2_Bacteroidetes_42_42 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
NHL repeat containing protein
Tax=GWF2_Bacteroidetes_43_63_curated
SCNpilot_cont_1000_p_scaffold_717_26
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

37483..42018
DNA (4536bp) protein (1512aa)
CHU large protein; uncharacterized id=4380903 bin=GWF2_Bacteroidetes_43_63 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77 rbh
NHL repeat containing protein
Tax=GWF2_Bacteroidetes_43_63_curated
SCNpilot_cont_1000_p_scaffold_717_27
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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42592..43269
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E8D8_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD95175.1}; Flags: Precursor;; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
Displaying 27 items

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