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SCNpilot_cont_1000_p_scaffold_2545

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2545_1
unknown

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3..437
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2545_2
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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657..2570
DNA (1914bp) protein (638aa)
von Willebrand factor type A n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TU53_MARTH
von willebrand factor type a; K07114 uncharacterized protein
von Willebrand factor type A {ECO:0000313|EMBL:ADR20981.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
SCNpilot_cont_1000_p_scaffold_2545_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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2570..3013
DNA (444bp) protein (148aa)
Acetyltransferases
GCN5-related N-acetyltransferase id=3513046 bin=GWC2_Nitrospirae_57_13 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
SCNpilot_cont_1000_p_scaffold_2545_4
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3036..3572)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036D2AA2
Uncharacterized protein {ECO:0000313|EMBL:AHJ96157.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
SCNpilot_cont_1000_p_scaffold_2545_5

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comp(3577..6414)
DNA (2838bp) protein (946aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=uncultured bacterium fCS1 RepID=C3U0R8_9BACT
DNA polymerase I {ECO:0000313|EMBL:ACL37108.1}; TaxID=585280 species="Bacteria; environmental samples.;" source="uncultured bacterium fCS1.;"
SCNpilot_cont_1000_p_scaffold_2545_6
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6935..7633
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GYA1_FLAPJ
hypothetical protein
Potassium channel protein {ECO:0000313|EMBL:AIG34224.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
SCNpilot_cont_1000_p_scaffold_2545_7
unknown

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7699..8205
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2545_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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8276..10573
DNA (2298bp) protein (766aa)
Two component regulator propeller n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI4_NIAKG
Two component regulator propeller
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_2545_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10576..11310
DNA (735bp) protein (245aa)
DNA repair protein RecO n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI5_NIAKG
DNA replication and repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_2545_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11650..13338
DNA (1689bp) protein (563aa)
Peptidase M23 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY0_CHIPD rbh
peptidase M23 rbh
Peptidase M23 {ECO:0000313|EMBL:ACU58677.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_2545_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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13373..13828
DNA (456bp) protein (152aa)
Peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin id=3032346 bin=GWF2_Bacteroidetes_41_9 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 11 items

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