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SCNpilot_cont_1000_p_scaffold_2866

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2866_1
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

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3..359
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
SCNpilot_cont_1000_p_scaffold_2866_2
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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359..3382
DNA (3024bp) protein (1008aa)
Predicted ATPase id=1879617 bin=GWE2_Bacteroidetes_42_39 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
ATPase rbh
Tax=BJP_IG2102_BRC1_58_13
SCNpilot_cont_1000_p_scaffold_2866_3
unknown

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comp(3385..3672)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2866_4
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3703..3966)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJ40_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM34554.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
SCNpilot_cont_1000_p_scaffold_2866_5
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4579..5712)
DNA (1134bp) protein (378aa)
hemolysin D n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5BE1D
Nickel and cobalt resistance protein CnrB {ECO:0000313|EMBL:KHJ38224.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
efflux transporter, RND family, MFP subunit
SCNpilot_cont_1000_p_scaffold_2866_6
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5717..10078)
DNA (4362bp) protein (1454aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVM3_EMTOG
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:KHJ38223.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
heavy metal efflux pump, CzcA family
SCNpilot_cont_1000_p_scaffold_2866_7
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10174..10587)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W190_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KHJ38222.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2866_8
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10698..11333)
DNA (636bp) protein (212aa)
3-oxo-5-alpha-steroid 4-dehydrogenase (EC:1.3.99.5)
3-oxo-5-alpha-steroid 4-dehydrogenase id=4132523 bin=GWF2_Bacteroidetes_49_14 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=RBG_13_Bacteroidetes_46_8_curated
SCNpilot_cont_1000_p_scaffold_2866_9
unknown

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comp(11320..11421)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2866_10
unknown

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comp(11525..11743)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2866_11
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11842..12186)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2J1I7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL61970.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
bleomycin resistance protein
SCNpilot_cont_1000_p_scaffold_2866_12
unknown

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comp(12285..12467)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 12 items

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