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SCNpilot_cont_1000_p_scaffold_1241

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1241_1
unknown

Not on your lists

comp(185..409)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1241_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(473..1237)
DNA (765bp) protein (255aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:ACU58388.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ACU58388.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Exodeoxyribonuclease III Xth n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK47_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_1241_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1239..1685)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035C3055
Uncharacterized protein {ECO:0000313|EMBL:CCH56920.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1241_4
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1781..3805)
DNA (2025bp) protein (675aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D48764 rbh
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EOR93697.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1241_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3834..5339)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7I7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02242.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_1241_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5418..5999
DNA (582bp) protein (194aa)
peroxiredoxin; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK33_CHIPD
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_1241_7
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6060..6614
DNA (555bp) protein (185aa)
peroxiredoxin; K00432 glutathione peroxidase [EC:1.11.1.9]
glutathione peroxidase n=1 Tax=Riemerella columbina RepID=UPI00037A5296
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
SCNpilot_cont_1000_p_scaffold_1241_8
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6641..7687
DNA (1047bp) protein (349aa)
Alkane 1-monooxygenase 1 {ECO:0000313|EMBL:EKB49167.1}; EC=1.14.15.3 {ECO:0000313|EMBL:EKB49167.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003658273
Fatty acid desaturase
SCNpilot_cont_1000_p_scaffold_1241_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7684..8244
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B62490
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_cont_1000_p_scaffold_1241_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8269..9342)
DNA (1074bp) protein (358aa)
Fatty acid desaturase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC29_CHIPD rbh
fatty acid desaturase rbh
Fatty acid desaturase {ECO:0000313|EMBL:ACU57657.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_1241_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9449..9769)
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLT3_CHIPD
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
thioredoxin; K03671 thioredoxin 1
SCNpilot_cont_1000_p_scaffold_1241_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9780..10097)
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLT3_CHIPD
thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_1241_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10256..13870)
DNA (3615bp) protein (1205aa)
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III subunit alpha n=1 Tax=Niabella aurantiaca RepID=UPI00037F733A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_1241_14
unknown

Not on your lists

14776..15729
DNA (954bp) protein (318aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1241_15
unknown

Not on your lists

comp(15845..16339)
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1241_16
unknown

Not on your lists

16442..17146
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1241_17
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17237..18292)
DNA (1056bp) protein (352aa)
aminoglycoside phosphotransferase n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E71DD
aminoglycoside phosphotransferase
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_cont_1000_p_scaffold_1241_18
unknown

Not on your lists

comp(18329..19120)
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1241_19
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19386..19970)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4E76C
Uncharacterized protein {ECO:0000313|EMBL:AII52515.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
SCNpilot_cont_1000_p_scaffold_1241_20
unknown

Not on your lists

comp(19945..20739)
DNA (795bp) protein (265aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1241_21
unknown

Not on your lists

comp(20900..21277)
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1241_22
unknown

Not on your lists

comp(21379..21876)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1241_23
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21993..23234)
DNA (1242bp) protein (414aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE85287.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
SCNpilot_cont_1000_p_scaffold_1241_24
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23430..24155)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LHC0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF11140.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1241_25
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

24303..25586
DNA (1284bp) protein (428aa)
PF13194 domain protein id=3622026 bin=GWF2_Bacteroidetes_42_66 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
Predicted membrane protein rbh
Tax=CG_Ignavi_01
SCNpilot_cont_1000_p_scaffold_1241_26
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25610..25801)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DG80_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHP48192.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
Pirin domain protein
Displaying 26 items

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