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SCNpilot_cont_1000_p_scaffold_1612

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1612_1
unknown

Not on your lists

2..115
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1612_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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247..867
DNA (621bp) protein (207aa)
Methyltransferase domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W020_9FLAO rbh
Methyltransferase domain protein {ECO:0000313|EMBL:EFK35981.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
protein with a methyltransferase domain
SCNpilot_cont_1000_p_scaffold_1612_3
unknown

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comp(763..978)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1612_4
unknown

Not on your lists

comp(1201..1548)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1612_5
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2044..2418
DNA (375bp) protein (125aa)
Single-stranded DNA-binding protein n=2 Tax=Flavobacterium RepID=A5FFD5_FLAJ1
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
single-strand binding protein/primosomal replication protein n; K03111 single-strand DNA-binding protein
SCNpilot_cont_1000_p_scaffold_1612_6
unknown

Not on your lists

2566..2742
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1612_7
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(2894..4282)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037D39F2 rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AFY35391.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
SCNpilot_cont_1000_p_scaffold_1612_8
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4676..5584)
DNA (909bp) protein (303aa)
Putative uncharacterized protein id=2256084 bin=GWB2_Clostridiales_37_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
SCNpilot_cont_1000_p_scaffold_1612_9
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5745..6134)
DNA (390bp) protein (130aa)
Lambda repressor-like DNA-binding protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BF82_ZUNPS
lambda repressor-like DNA-binding protein
Lambda repressor-like DNA-binding protein {ECO:0000313|EMBL:ADF52980.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_cont_1000_p_scaffold_1612_10
unknown

Not on your lists

6252..6833
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1612_11
unknown

Not on your lists

6869..7468
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1612_12
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7826..12970
DNA (5145bp) protein (1715aa)
PDK repeat-containing protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R4B7_OWEHD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO81222.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
PDK repeat-containing protein rbh
SCNpilot_cont_1000_p_scaffold_1612_13
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13067..14998
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R6N9_OWEHD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO81221.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1612_14
unknown

Not on your lists

comp(15046..15507)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000363D562
SCNpilot_cont_1000_p_scaffold_1612_15
unknown

Not on your lists

comp(15485..15718)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1612_16

Not on your lists

comp(15916..16146)
DNA (231bp) protein (77aa)
Marine sediment metagenome DNA, contig: S01H4_C02350 {ECO:0000313|EMBL:GAG60202.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_1000_p_scaffold_1612_17
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(16659..17060)
DNA (402bp) protein (134aa)
hypothetical protein id=15187906 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
SCNpilot_cont_1000_p_scaffold_1612_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17130..18905)
DNA (1776bp) protein (592aa)
DNA invertase {ECO:0000313|EMBL:BAR57702.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
Putative site-specific recombinase, resolvase family id=15189732 bin=GWB1_SUB10_ACD81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
Putative site-specific recombinase, resolvase family
SCNpilot_cont_1000_p_scaffold_1612_19
unknown

Not on your lists

comp(18910..19104)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1612_20
R_RIF_OD1_04_46_36, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

19228..20391
DNA (1164bp) protein (388aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI00037DC3B8 rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_04_46_36_curated
Displaying 20 items

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