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SCNpilot_cont_1000_p_scaffold_1900

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1900_1
unknown

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3..89
DNA (87bp) protein (29aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1900_2
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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247..723
DNA (477bp) protein (159aa)
DNA-binding protein; DPS family protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11TH7_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:KGE86955.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
dps; DNA-binding protein; DPS family protein; K04047 starvation-inducible DNA-binding protein
SCNpilot_cont_1000_p_scaffold_1900_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(715..2043)
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRZ4_CHIPD
histidine kinase
SCNpilot_cont_1000_p_scaffold_1900_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2238..2735
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QME4_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39207.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_1900_5
unknown

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comp(2739..3239)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1900_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3398..5677
DNA (2280bp) protein (760aa)
oxaloacetate-decarboxylating malate dehydrogenase (NADP(+)) phosphate acetyltransferase; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
Oxaloacetate-decarboxylating malate dehydrogenase (NADP(+)) phosphate acetyltransferase {ECO:0000313|EMBL:ACU58707.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ACU58707.1};; EC=2.3.1.8 {ECO:0000313|EMBL:ACU58707.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Oxaloacetate-decarboxylating malate dehydrogenase (NADP(+)) phosphate acetyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP10_CHIPD
SCNpilot_cont_1000_p_scaffold_1900_7
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5707..6918
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363977E
hi0933 family protein; K07007 rbh
HI0933 family protein {ECO:0000313|EMBL:ADR21075.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
SCNpilot_cont_1000_p_scaffold_1900_8
unknown

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comp(6994..7188)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1900_9
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7312..9087)
DNA (1776bp) protein (592aa)
Fibronectin type III domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID20_FLUTR
Fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:AEA44414.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_cont_1000_p_scaffold_1900_10
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9213..9575)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B7A9C4
Contig58, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76649.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1900_11
unknown

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9688..9912
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1900_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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9948..12284
DNA (2337bp) protein (779aa)
serine/threonine protein kinase (EC:2.7.11.17)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000366F0E7
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
SCNpilot_cont_1000_p_scaffold_1900_13
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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12412..12816
DNA (405bp) protein (135aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W012_DYAFD
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:GAL87725.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_cont_1000_p_scaffold_1900_14
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12899..13378
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S570_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO97079.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1900_15
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13389..14327
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHP7_ELIME rbh
Pyrroloquinoline quinone biosynthesis protein PqqB {ECO:0000313|EMBL:KIA88022.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1900_16
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14331..15014)
DNA (684bp) protein (228aa)
iyd; iodotyrosine dehalogenase (EC:1.-.-.-)
Nitroreductase family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JRR3_9BACT rbh
Nitroreductase family protein {ECO:0000313|EMBL:ELR70883.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
SCNpilot_cont_1000_p_scaffold_1900_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

15288..17798
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCE3_9BACT rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Displaying 17 items

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