ggKbase home page

SCNpilot_cont_1000_p_scaffold_7582

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7582_1
Fibrobacter succinogenes, Fibrobacter, Fibrobacterales, Fibrobacteria, Fibrobacteres, Bacteria

Not on your lists

1..1638
DNA (1638bp) protein (546aa)
FG-GAP repeat protein n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RNI6_FIBSS
FG-GAP repeat-containing protein
Insecticidal toxin-like protein {ECO:0000313|EMBL:ADL24647.1}; TaxID=59374 species="Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.;" source="Fibrobacter succinogenes (strain ATCC 19169 / S85).;"
SCNpilot_cont_1000_p_scaffold_7582_2
unknown

Not on your lists

1640..2107
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7582_3
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2206..2943
DNA (738bp) protein (246aa)
Glycosyl transferase n=1 Tax=Polaromonas sp. CF318 RepID=J3D2B0_9BURK
Contig53, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76842.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
wcaA1; glycosyltransferase
SCNpilot_cont_1000_p_scaffold_7582_4
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2966..3637
DNA (672bp) protein (224aa)
Glycosyl transferase family 2 n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KL33_SHEWM
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACA84374.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;"
SCNpilot_cont_1000_p_scaffold_7582_5

Not on your lists

3649..4218
DNA (570bp) protein (190aa)
Methyltransferase type 11 n=1 Tax=uncultured bacterium RepID=K2ESM6_9BACT
Marine sediment metagenome DNA, contig: S01H4_S04663 {ECO:0000313|EMBL:GAG96300.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7582_6
unknown

Not on your lists

4215..4913
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7582_7
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

4901..5521
DNA (621bp) protein (207aa)
Beta-1,4-N-acetylgalactosaminyltransferase bre-4 {ECO:0000313|EMBL:KIC71097.1}; EC=2.4.1.- {ECO:0000313|EMBL:KIC71097.1};; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
Putative UDPgalactose-glucose galactosyltransferase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBD1_PARUW
udpgalactose-glucose galactosyltransferase
SCNpilot_cont_1000_p_scaffold_7582_8
unknown

Not on your lists

comp(5606..5965)
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7582_9
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6003..6329)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO81971.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
id=2665050 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
SCNpilot_cont_1000_p_scaffold_7582_10
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6340..6762)
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=2665048 bin=GWF2_Bacteroidetes_38_335 species=Marinomonas mediterranea genus=Marinomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=GWF2_Bacteroidetes_38_335_curated
SCNpilot_cont_1000_p_scaffold_7582_11
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6781..7698)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DID5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHF00066.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7582_12
unknown

Not on your lists

comp(7711..7956)
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 12 items

View Taxonomy