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SCNpilot_cont_1000_p_scaffold_309_37

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 33609..37028

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTU3_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 999.99
  • Bit_score: 1372
  • Evalue 0.0
  • rbh
Multidrug resistance protein MdtC {ECO:0000313|EMBL:KHJ37463.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 999.99
  • Bit_score: 1376
  • Evalue 0.0
cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 999.99
  • Bit_score: 1372
  • Evalue 0.0
  • rbh

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3420
ATGAAAGACGTATTCAAAGAGTTCAAACCGTCCAGTTGGGCCATTAATAACCGCACAGCTGTATATATAGTTACCGTCATCATTACCCTGGCGGGCCTGGTGACCTATAACAGCCTGCCCAAAGAGCAGTTCCCCGAGATCAAATTTCCACAGATCATCGTGCAGACCGTTTATCCCGGTACATCGCCGGAGAATATGGAGAACCTGGTGACCAAGCCGATAGAAAAGCAGGTGAAGAACCTTACCGGCGTTAAGAAGGTGACCAGTAATTCATTCCAGGATTATTCGGTGGTGATAGTGGAGTTCAATACGGATGTAAAAGTGGATAAGGCCAAAGTGGATGTAAAGGATGCCGTAGATAAAGCCAAGCAGGATCTGCCGAACAACCTGCCTAACCAGCCTGAGGTAAAGGATATAGACCTTACCGAGTTCCCTATATTATATGTGAATATATCGGGCAACTACGACCTGAACAGGTTGAAGAAATATGCCGACAGGGTAAAGGATAATATAGAAGAGCTGAAAGAGATAAAGCGTGTGGATATGGTAGGGGCCCTGGATCGCGAGATACAGATAAATGTAGACCTGTACCGTATGCAGGCAGCGGGGCTTACATTTGATGATATTGACCGTGCCATTGCTTCGGAGAACTTGTCGCTAACGGCTGGTGAAGTGGCTATGAATGGCCAGAAACGCATTCTTAGTATACGTAACGAGTTTAAAACAGCAGCACAAATAGGTGATATCATTGTGCGTAACCAGCAAGGCAAGGCCATATATATAAAAGACATAGCCGATGTAAAGGATGATTTCGAAGAGCAAAAAAGCTATGCCCGCCTGAATGGGGAAAATGTAATAACGCTGAATATCATTAAGGCTAAAGGCCAGAACCTTATCGATGCCTCGGATAAGATACAATCCCTTATAGAGGAAATGAAGGCCAGCGAGCTGCCCAAAGACCTCAGCATAGTAATTACTGGCGATCAGTCACAGACCACGAGGAATACACTGCATGACCTGGTGAATACCATCATCATCGGTTTTATACTGGTTACGATCATCCTCATGTTCTTTATGGGGGTTACCAATGCCCTGTTCGTGGCCATGTCCGTGCCACTGTCTTGTGCACTGGCATTTTTGGTCATGCCTTCACTTGGCTTCACGCTCAATATGATCGTGCTCTTCTCCTTCCTGCTGGCATTGGGTATCGTGGTGGATGATGCGATAGTGGTGATAGAGAACACGCACCGTATTTTTGATAACGGCAAAATGCCGATAGCGAAAGCAGCCAAATATGCTACCGGCGAAGTATTCCTGCCGGTACTGTCAGGCACCGCCACTACATTGATGCCTTTTATTCCCCTTGCCTTCTGGAAAGGAGTTATCGGCTCGTTCATGTTCTTCCTCCCCATAACGCTTATCATTACACTCGTGGCCTCGCTTGTGGTCGCATACCTCATCAACCCTGTATTCGCGGTTAGCTTCATGAAGCCGGAAAAACCTTATGATAGCAAAGCCAAAAAACGTTTCACGAAACGCGACCGCGTATTACTGGTGATCTTCCTTGCGCTGGCCCTGCTTTGCGATATAGCCGGCTCATGGGCAATGGGCAACTTCATCATATTCATTTACCTCTTCATCCTGCTCGAGAAGTATGTGTTCGAAAAGTGGATACATAAGTTCCAGAACAAAACATGGCCTGCATTCCGCGAATGGTATACCAGGTGGCTGAAGCGCGCACTGGCAAGGCCGGGATTGGTGATGATCGTAACGGTTGTGTTGTTTGTGGTAGCTTTTGTTGGTTATGGATTGCGTAACCCGCCTTTCGTGTTCTTCCCGTCGGCCGACCCTAACTTTACTTATGTGTACCTTAATATGCCTGTAGGTACCGACCAGGCGCGCACCAATGAGGTGTTGAAAGATATAGAAGCGAAGGTGAATAAGGCATTGGGTAATGACATAAAGCACAACAAGCTCAACCCGATCGTGAAATCGGTGATATCGAATGTAACGGTTGGGGCAGTGGATCCTACGTCAAACGAGATAGGTGATTTTCCGAACAAGGGTAAGATAACTGTGGCCTATGTGGAATATGCCGAGCGCAACGGTGAATCGACAGCGGACTACATGGAGAAGATACGCAAGGCTGTGAAGGGTGTACCCGGTGCCGTAGTTACTGTGGATAAGGAACAAGGCGGCCCGCCATTGCCTAAACCCATAGTAGTGGAGATAACCGGTGACGACCTGGATACACTTGTGGCTACTTCCGAAAATTTGAAACGTTTCCTTGATAAGAAACAGGTACCCGGTGTGGAAGAACTCCGCAGCGATTTCCAGGCCGATAAACCTGAAATAGTTTTTGACCTCGACCGGGCAAGAATGAATTCTGAAGGTATATCTACCTATACCATTGCAGCCAACCTGCGTACTGCGGTCTTCGGTAAGGAGATATCCCGCTTCCGCGATGCGAACGATGATTATCCTATTATGCTGCGCCTGGAGCAGCAGCAGCGCGGCGATATCGATGCGGTGCGCAACATGCCTATCGTGTATCGCGATATGGGCCTGGGAGGCATTATCAGGCAGGTGCCGGTGAGCTCCTTTGCCGATGTGCAATATGGTACTACCTATGGTGGTATCAAGCGCAAGGATGAGAAACGCATTATCTCACTTTCCTCGAACGTAATTACGGGATTTAACGATAATGATGTGGTGGCCGCTGTGCAGAAGGCGGTAGACGAGTTCCATGCTCCATCGGGCATCAGCATCAAGATGAGCGGCCAGCAGGAAGACCAGAAAGAGACAGGCTCTTTCCTCTTAGGCGCCTTTGGCATCTCGATAGGCCTGATATTTATGATACTTGTATTGCAGTTCAATTCCCTGAGCCGCACGGTCATCATTATGACAGAGGTGGTGTTCAGTCTCGTTGGTGTGTTCCTTGGCTATGCCATAGTAGGCAATACCTTCTCGATGGTAATGAGCGGTATCGGTATCGTGGCCCTTTGCGGTATAGTAGTGCGTAACGGTATACTGCTGGTGGAATTCATGGACCTGATGCTGAAAGAAGGTATGAGCGGGTACGATGCCATCGTGGAAGCAGGCCGCACCCGTATGACGCCCGTGCTGCTTACGGCCACAGCCGCTATCCTCGGCCTGATACCTTTGGGCATCGGCCTGAACATAGATTTCTATGAACTGCTGCGCCACTTTAACCCCCATATATTCTTTGGCGGCGACAGTGTGGCCTTCTGGGGGCCGCTGGCATGGACCATGATATATGGCCTTAGCTTCGCCACATTCCTTACGCTTATCGTAGTGCCGGTTATGTGCCTGCTGAGCTTCAGGTTCAAAGACTGGGTGGCGAAGAAAAGGAATAAAATTAATGAGTCACTTAAAGAAGATGATCCCATAGTAGAATAG
PROTEIN sequence
Length: 1140
MKDVFKEFKPSSWAINNRTAVYIVTVIITLAGLVTYNSLPKEQFPEIKFPQIIVQTVYPGTSPENMENLVTKPIEKQVKNLTGVKKVTSNSFQDYSVVIVEFNTDVKVDKAKVDVKDAVDKAKQDLPNNLPNQPEVKDIDLTEFPILYVNISGNYDLNRLKKYADRVKDNIEELKEIKRVDMVGALDREIQINVDLYRMQAAGLTFDDIDRAIASENLSLTAGEVAMNGQKRILSIRNEFKTAAQIGDIIVRNQQGKAIYIKDIADVKDDFEEQKSYARLNGENVITLNIIKAKGQNLIDASDKIQSLIEEMKASELPKDLSIVITGDQSQTTRNTLHDLVNTIIIGFILVTIILMFFMGVTNALFVAMSVPLSCALAFLVMPSLGFTLNMIVLFSFLLALGIVVDDAIVVIENTHRIFDNGKMPIAKAAKYATGEVFLPVLSGTATTLMPFIPLAFWKGVIGSFMFFLPITLIITLVASLVVAYLINPVFAVSFMKPEKPYDSKAKKRFTKRDRVLLVIFLALALLCDIAGSWAMGNFIIFIYLFILLEKYVFEKWIHKFQNKTWPAFREWYTRWLKRALARPGLVMIVTVVLFVVAFVGYGLRNPPFVFFPSADPNFTYVYLNMPVGTDQARTNEVLKDIEAKVNKALGNDIKHNKLNPIVKSVISNVTVGAVDPTSNEIGDFPNKGKITVAYVEYAERNGESTADYMEKIRKAVKGVPGAVVTVDKEQGGPPLPKPIVVEITGDDLDTLVATSENLKRFLDKKQVPGVEELRSDFQADKPEIVFDLDRARMNSEGISTYTIAANLRTAVFGKEISRFRDANDDYPIMLRLEQQQRGDIDAVRNMPIVYRDMGLGGIIRQVPVSSFADVQYGTTYGGIKRKDEKRIISLSSNVITGFNDNDVVAAVQKAVDEFHAPSGISIKMSGQQEDQKETGSFLLGAFGISIGLIFMILVLQFNSLSRTVIIMTEVVFSLVGVFLGYAIVGNTFSMVMSGIGIVALCGIVVRNGILLVEFMDLMLKEGMSGYDAIVEAGRTRMTPVLLTATAAILGLIPLGIGLNIDFYELLRHFNPHIFFGGDSVAFWGPLAWTMIYGLSFATFLTLIVVPVMCLLSFRFKDWVAKKRNKINESLKEDDPIVE*