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SCNpilot_cont_1000_p_scaffold_309_62

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(72353..72850)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Segetibacter koreensis RepID=UPI00037E7806 similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 187
  • Evalue 9.30e-45
RNA polymerase sigma factor {ECO:0000313|EMBL:KHD90204.1}; TaxID=1511133 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 165.0
  • Bit_score: 187
  • Evalue 1.70e-44
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 165.0
  • Bit_score: 184
  • Evalue 2.50e-44

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Taxonomy

candidate division TM6 bacterium Zodletone_IIa → Bacteria

Sequences

DNA sequence
Length: 498
ATGACGGCAACCGATTTTAACGAACTCGTAGTACTACATAGTGATTTTTTAAAACCCTATGCAATATCACTCACCCGGGACAGCGAAAATGCTAAAGACCTTTTCCAGGAAACTATATTCAAAGCACTGCTCAACAGGGAGAAATATCACTTTGGTACCAACCTGAAGGCATGGCTGCATACCATAATGCGCAACATATTTATAAATGGCTACAGGCGCAATAAGAAATATAACTACTCGGATAATTTACCTGCGGCCGAAGCCCATTTATATGGCAAGGGCAATGCATTACAGAACAATGGTATCAGCAGGCTGCAGGTTGCTGAAATAGAAGCAGCTATCAACGATCTCCCACATGTATTTCGTATTGCTTTCGAGCTGCATTATACCGGTTACAAATACCAGGAAATTGCCGACTTGCTTAAAGAGCCTTTGGGCACGGTGAAAAGCCGCATCCATTTTGCCCGCAAGCTGTTGATGGCCAAACTGGAGCGTTAA
PROTEIN sequence
Length: 166
MTATDFNELVVLHSDFLKPYAISLTRDSENAKDLFQETIFKALLNREKYHFGTNLKAWLHTIMRNIFINGYRRNKKYNYSDNLPAAEAHLYGKGNALQNNGISRLQVAEIEAAINDLPHVFRIAFELHYTGYKYQEIADLLKEPLGTVKSRIHFARKLLMAKLER*