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SCNpilot_cont_1000_p_scaffold_348_32

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(35818..37614)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 597.0
  • Bit_score: 1029
  • Evalue 0.0
Elongation factor 4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ4_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 597.0
  • Bit_score: 1029
  • Evalue 0.0
  • rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 597.0
  • Bit_score: 1029
  • Evalue 0.0
  • rbh

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1797
ATGAGAAACATTAGAAATTTTTGCATAATAGCTCATATCGACCATGGTAAAAGTACCCTGGCCGACCGCCTACTGGAACATACCAAAACCATCAGCGAACGCGATATGCAGGCGCAGGTGCTGGATGATATGGACCTGGAGCGTGAGAAGGGCATTACCATCAAGAGCCACGCCATACAGATGGACTATGAGCACAATGGCGAAAAATATGTGCTGAACCTGATAGATACCCCCGGTCATGTGGACTTCAGCTACGAGGTGAGCCGTGCACTGGCGGCCTGCGAGGGCGCACTGCTGCTGGTGGATGCCAGCCAGGGCATACAGGCGCAGACCATCAGCAACCTGTACCTGGCACTGGATAATGACCTGGAGATCATACCCGTGATCAATAAGATAGATATGGAAGGCGCCATGATACCCGAGGTGACCGACCAGATAGTGGACCTGATAGGCTGCAAGCCGGAAGATATCATACTGGCCAGCGGCAAGAGCGGCATAGGCATAGAGGACATCATGACAGCTGTAGTAGAGCGTATACCCTCCCCTAAGGGCAACCCGGATGCGCCGCTGCAAGCCCTGATCTTCGATAGCGTGTTCAACTCGTTCCGCGGTATCATTGCGTATTTCCGCGTGAAGAACGGCACGATCAATAAAGGTGATAAAGTAAAGTTTTACCATACCGGCGGCGAGTACTATGCTGACGAGGTGGGCGTACTGAAACTGGGCCTGCAACCTAAAAAGAGCGTGAGCGCAGGGGATGTGGGTTATATCATCACCGGCATCAAGAATGCCAAAGAGGTGAAAGTGGGCGATACCATCACTACGGTGGCGAACCCGACACAGGAAGTAGTGAAAGGCTTCGAGGAAGTGAAGCCAATGGTATTTGCAGGCATATTCCCCGTGGAGACCGATGATTTTGAAGAGCTGCGCGAGTGCATGGAAAAGTTGCAGCTTAACGATGCTTCGCTGACCTTTGAACCAGAGACATCGCAGGCCCTCGGCTTCGGTTTCCGTTGCGGCTTCCTGGGCATGCTGCACATGGAGATCATACAGGAAAGACTGGAGCGCGAGTTCAATCAAACGGTGATCACTACGGTGCCCAACGTTAGCTTTAAGGCTTACCTGACCCGTGAAAAGGACAAGGCCGTAACGGTGAATAACCCGAGCGAGATGCCCGACCCCAGCAGGCTGGACCGTATTGAGGAGCCTTTTATCCGTGCCCAGATCATTACATTACCCGACTATATAGGCAATATCATGAGCCTGTGCCTTGGTAAGCGCGGCCTGCTGATCAACCAGCACTACCTGACGCCTACGCGCGTGGAGCTGATATTTGAGCTGCCACTCACGGAAATAGTATTCGACTTCTACGATAAACTGAAATCATCTACAAGGGGCTATGCCTCCTTCGACTACCACCCCCTGGACTACCGCGAGAGCGATATAGCCAAGATGGATATACTGCTGAACGGCGACAAGGTGGATGCCCTGAGCGCACTGATACACCGCAGCCGCGCGCAGGACTTTGGCCGCAAACTATGCTCGAAACTGAAGGAGCTATTGCCCCGCCAGCAGTTCATGATAGCCATACAGGCTGCCATAGGCGCCAAGATAGTGGCCAGAGAAACGATATCGGCCATGAGAAAGGACGTAACGGCCAAATGCTATGGCGGTGACATATCGCGTAAGCGCAAGCTGCTGGAAAAGCAGAAAGCAGGTAAGAAGCGTATGCGCCAGATAGGCAACGTGGATGTGCCGCAGGAGGCATTCCTGGCGGTATTGAAGCTTGATGACTAA
PROTEIN sequence
Length: 599
MRNIRNFCIIAHIDHGKSTLADRLLEHTKTISERDMQAQVLDDMDLEREKGITIKSHAIQMDYEHNGEKYVLNLIDTPGHVDFSYEVSRALAACEGALLLVDASQGIQAQTISNLYLALDNDLEIIPVINKIDMEGAMIPEVTDQIVDLIGCKPEDIILASGKSGIGIEDIMTAVVERIPSPKGNPDAPLQALIFDSVFNSFRGIIAYFRVKNGTINKGDKVKFYHTGGEYYADEVGVLKLGLQPKKSVSAGDVGYIITGIKNAKEVKVGDTITTVANPTQEVVKGFEEVKPMVFAGIFPVETDDFEELRECMEKLQLNDASLTFEPETSQALGFGFRCGFLGMLHMEIIQERLEREFNQTVITTVPNVSFKAYLTREKDKAVTVNNPSEMPDPSRLDRIEEPFIRAQIITLPDYIGNIMSLCLGKRGLLINQHYLTPTRVELIFELPLTEIVFDFYDKLKSSTRGYASFDYHPLDYRESDIAKMDILLNGDKVDALSALIHRSRAQDFGRKLCSKLKELLPRQQFMIAIQAAIGAKIVARETISAMRKDVTAKCYGGDISRKRKLLEKQKAGKKRMRQIGNVDVPQEAFLAVLKLDD*