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SCNpilot_cont_1000_p_scaffold_2234_10

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(9663..10298)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPD5_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 209.0
  • Bit_score: 248
  • Evalue 7.40e-63
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 209.0
  • Bit_score: 248
  • Evalue 2.30e-63
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACU60571.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 209.0
  • Bit_score: 248
  • Evalue 1.00e-62

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 636
ATGAGCATTAAGGTAGTAGTAATAGAAGACCAGAAGGAGACGCGTGATATGCTGGCTATTTTGATAAATAGCAGCGGGGAATATGAATGCACCGGTACCTTTGCCAATAGCGAAGATGCCCTGGAGCATATACCCCGGCTTTTGCCTGATGTTGCCCTCGTTGATATCAACCTGCCGGGCATTTCGGGTACGGAATGTGTTGCCAGGCTCAGGGGCTTATGTCCTTCGGTACAGTATATCATGTGTACCTCGCTTGAAGATTCCGATACCATTTTCGCTGCACTACAGGCTGGGGCCAGTGGCTATATTACCAAGTCGGCGCCGCCGGCCAAAATGTTGGAAGCAATAAACGATGTACATAATGGAGGCTCACCTATGAGCAGCCAGATAGCCCGCAAAGTAGTGGCCTTCTTTCAGCAAAAAGAACAAGTGAAGAATAATGCTGAGCTGCAAAAGCTCTCTCCCCGGGAGCAGGAGATCCTGGATTTCCTCTCAAAGGGCTTCCGTTACAAGGAGATCGCGGCCACGCTCTTCCTCAGTATAGAAACAGTGCGTAAGCATATCCATAATATATACGAAAAGCTACAGGTCGATTCCCGTACCGACGCCCTCAATAAGATATATACCAGGAGATAA
PROTEIN sequence
Length: 212
MSIKVVVIEDQKETRDMLAILINSSGEYECTGTFANSEDALEHIPRLLPDVALVDINLPGISGTECVARLRGLCPSVQYIMCTSLEDSDTIFAALQAGASGYITKSAPPAKMLEAINDVHNGGSPMSSQIARKVVAFFQQKEQVKNNAELQKLSPREQEILDFLSKGFRYKEIAATLFLSIETVRKHIHNIYEKLQVDSRTDALNKIYTRR*