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SCNpilot_cont_1000_p_scaffold_2234

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2234_1
unknown

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243..464
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2234_2
unknown

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834..1130
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2234_3
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1212..2807
DNA (1596bp) protein (532aa)
Tfp pilus assembly protein PilF n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R7I1_OWEHD rbh
Tfp pilus assembly protein PilF rbh
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:AEV32334.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
SCNpilot_cont_1000_p_scaffold_2234_4
Leptospira licerasiae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(2835..4391)
DNA (1557bp) protein (519aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1049972 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira licerasiae serovar Varillal str. VAR 010.;"
PAS domain S-box protein n=2 Tax=Leptospira licerasiae RepID=I0XTK1_9LEPT
multi-sensor signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_2234_5
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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4521..5288
DNA (768bp) protein (256aa)
DNA alkylation repair enzyme n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HHV4_9LEPT
DNA alkylation repair enzyme {ECO:0000313|EMBL:EQA52024.1}; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2234_6
Leptospira kirschneri, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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5266..6153
DNA (888bp) protein (296aa)
Radical SAM domain protein n=4 Tax=Leptospira kirschneri RepID=J4T2E2_9LEPT rbh
Radical SAM domain protein {ECO:0000313|EMBL:EPG49395.1}; TaxID=1049942 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kirschneri serovar Cynopteri str. 3522 CT.;"
splB; DNA repair photolyase SplB rbh
SCNpilot_cont_1000_p_scaffold_2234_7
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6432..8093
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J634_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EAZ94733.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_2234_8
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8090..8518)
DNA (429bp) protein (143aa)
GCN5-related N-acetyltransferase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FNM8_9FLAO
GCN5 family acetyltransferase {ECO:0000313|EMBL:KIA86995.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
GCN5-like N-acetyltransferase
SCNpilot_cont_1000_p_scaffold_2234_9
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8636..9574)
DNA (939bp) protein (313aa)
Peptidase M36 fungalysin id=4666400 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_cont_1000_p_scaffold_2234_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9663..10298)
DNA (636bp) protein (212aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPD5_CHIPD
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACU60571.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_2234_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10352..13582)
DNA (3231bp) protein (1077aa)
Putative periplasmic ligand-binding sensor domain protein id=3529817 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
histidine kinase rbh
Tax=RBG_16_Ignavibacteria_34_14_curated
SCNpilot_cont_1000_p_scaffold_2234_12
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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13621..15549
DNA (1929bp) protein (643aa)
Histidine kinase id=4016435 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
histidine kinase rbh
Tax=GWF2_Bacteroidetes_35_48_curated
Displaying 12 items

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