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SCNpilot_expt_500_bf_scaffold_629

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_629_1
unknown

Not on your lists

1..78
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_629_2
unknown

Not on your lists

comp(218..493)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_629_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(676..2268)
DNA (1593bp) protein (531aa)
Putative recombinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUV1_9SPHN rbh
Putative recombinase {ECO:0000313|EMBL:GAD49164.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
site-specific recombinase, DNA invertase Pin rbh
SCNpilot_expt_500_bf_scaffold_629_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2353..3222
DNA (870bp) protein (290aa)
Mg chelatase-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB43_9SPHN
Mg chelatase-like protein {ECO:0000313|EMBL:ENY80983.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Mg chelatase-like protein; K07391 magnesium chelatase family protein
SCNpilot_expt_500_bf_scaffold_629_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3225..3587)
DNA (363bp) protein (121aa)
Response regulator receiver protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URM0_9SPHN
Response regulator receiver protein {ECO:0000313|EMBL:ENY80984.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
response regulator receiver protein
SCNpilot_expt_500_bf_scaffold_629_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3677..3949
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR80_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80985.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_629_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3946..4587
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBY6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80986.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_629_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4616..5080
DNA (465bp) protein (155aa)
Endoribonuclease L-PSP n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0G1_9SPHN
Endoribonuclease L-PSP {ECO:0000313|EMBL:ENY80987.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
endoribonuclease L-PSP
SCNpilot_expt_500_bf_scaffold_629_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5088..6236
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB46_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80988.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09919 hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_629_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6241..6555)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URM4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80989.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_629_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6798..7637)
DNA (840bp) protein (280aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; Pantothenate synthetase; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopy
pantoate--beta-alanine ligase; K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] rbh
Pantothenate synthetase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR85_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_629_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7722..8531
DNA (810bp) protein (270aa)
Chromosome partitioning ATPase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBZ3_9SPHN rbh
Chromosome partitioning ATPase {ECO:0000313|EMBL:ENY80991.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
chromosome partitioning ATPase rbh
SCNpilot_expt_500_bf_scaffold_629_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8557..9951
DNA (1395bp) protein (465aa)
phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] rbh
Phosphomannomutase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0G6_9SPHN rbh
Phosphomannomutase {ECO:0000313|EMBL:ENY80992.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_629_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10179..10991
DNA (813bp) protein (271aa)
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] rbh
ABC transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB51_9SPHN rbh
ABC transporter {ECO:0000313|EMBL:ENY80993.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_629_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11131..12585
DNA (1455bp) protein (485aa)
RNA polymerase sigma-54 factor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URN0_9SPHN rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
RNA polymerase factor sigma-54; K03092 RNA polymerase sigma-54 factor rbh
SCNpilot_expt_500_bf_scaffold_629_16
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12778..12903
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=8 Tax=Sphingomonadaceae RepID=RL36_SPHAL
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_500_bf_scaffold_629_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12998..13609
DNA (612bp) protein (204aa)
HAD family hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBZ8_9SPHN rbh
HAD family hydrolase {ECO:0000313|EMBL:ENY80996.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
HAD family hydrolase rbh
SCNpilot_expt_500_bf_scaffold_629_18
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13616..14266
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6J8_9SPHN
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KHL24310.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_629_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14277..16346)
DNA (2070bp) protein (690aa)
oligopeptidase B; K01354 oligopeptidase B [EC:3.4.21.83] rbh
Oligopeptidase B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0H1_9SPHN rbh
Oligopeptidase B {ECO:0000313|EMBL:ENY80997.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_629_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16464..18290
DNA (1827bp) protein (609aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] rbh
Peptidase M24 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB56_9SPHN rbh
Peptidase M24 {ECO:0000313|EMBL:ENY80998.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_629_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18301..18762
DNA (462bp) protein (154aa)
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URN5_9SPHN rbh
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:ENY80999.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_629_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19038..19505
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR95_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81000.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_629_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19511..20440
DNA (930bp) protein (310aa)
riboflavin biosynthesis protein RibD; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC04_9SPHN rbh
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:ENY81001.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_629_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20449..21075
DNA (627bp) protein (209aa)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:ENY81002.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ENY81002.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] rbh
Riboflavin synthase subunit alpha n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0H7_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_629_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21072..21434
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB59_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81003.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_629_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21444..21914)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URN9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81004.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_629_27
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21928..22473)
DNA (546bp) protein (182aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URA0_9SPHN rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
single-strand binding protein; K03111 single-strand DNA-binding protein rbh
SCNpilot_expt_500_bf_scaffold_629_28
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22505..24376)
DNA (1872bp) protein (624aa)
Ferrous iron transport protein B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC09_9SPHN rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:ENY81006.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ferrous iron transport protein B; K04759 ferrous iron transport protein B rbh
SCNpilot_expt_500_bf_scaffold_629_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24373..24624)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0I2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81007.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K04758 ferrous iron transport protein A
SCNpilot_expt_500_bf_scaffold_629_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24687..25373)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB65_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81008.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
Displaying items 1-30 of 59 in total

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