name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_917_1
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(75..299)
|
Integrase catalytic subunit n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C3X9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA09581.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
integrase catalytic subunit
|
|
SCNpilot_expt_500_bf_scaffold_917_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(360..1835)
|
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CPE2_SPHYA
rbh
Transposase IS66 {ECO:0000313|EMBL:AJA09580.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1867..2223)
|
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CVP8_SPHYA
IS66 Orf2 family protein {ECO:0000313|EMBL:AJA09579.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
IS66 Orf2 family protein; K07484 transposase
|
|
SCNpilot_expt_500_bf_scaffold_917_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2220..2663)
|
transposase IS3 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B67DCC
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AJA09578.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transposase IS3/IS911 family protein; K07483 transposase
|
|
SCNpilot_expt_500_bf_scaffold_917_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2660..3436)
|
Integrase, catalytic region n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GS92_SPHAL
rbh
Integrase catalytic subunit {ECO:0000313|EMBL:AJA09577.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
integrase catalytic subunit
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3617..4201)
|
TetR/AcrR family transcriptional regulator n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C249
TetR/AcrR family transcriptional regulator {ECO:0000313|EMBL:AJA09576.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_500_bf_scaffold_917_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4373..5986)
|
Medium-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:AJA09575.1}; EC=6.2.1.- {ECO:0000313|EMBL:AJA09575.1};; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
|
|
SCNpilot_expt_500_bf_scaffold_917_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6201..6614)
|
Beta-lactamase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ57_SPHAL
Beta-lactamase {ECO:0000313|EMBL:AJA09574.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
beta-lactamase
|
|
SCNpilot_expt_500_bf_scaffold_917_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7296..8036
|
Transcriptional regulator, GntR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ58_SPHAL
GntR family transcriptional regulator {ECO:0000313|EMBL:AJA09573.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
GntR family transcriptional regulator
|
|
SCNpilot_expt_500_bf_scaffold_917_10
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8033..9337
|
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ59_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:AJA09572.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_917_11
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9444..11624
|
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ60_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KJS26453.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
TonB-dependent receptor
|
|
SCNpilot_expt_500_bf_scaffold_917_12
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11680..13227
|
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000378B437
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_13
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13289..14521
|
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ62_SPHAL
rbh
Putative secreted protein {ECO:0000313|EMBL:AJA09569.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_14
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14807..15217)
|
Thioesterase superfamily protein n=2 Tax=Sphingomonas aromaticivorans RepID=A4XDY8_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AJA09568.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
thioesterase superfamily protein
|
|
SCNpilot_expt_500_bf_scaffold_917_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15214..16092)
|
Alpha/beta hydrolase fold n=2 Tax=Sphingomonas aromaticivorans RepID=A4XDY9_NOVAD
rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:AJA09567.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
alpha/beta hydrolase fold
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_16
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16140..16661
|
Transcriptional regulator, TrmB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XDZ0_NOVAD
Transcriptional regulator, TrmB {ECO:0000313|EMBL:AJA09566.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transcriptional regulator, TrmB
|
|
SCNpilot_expt_500_bf_scaffold_917_17
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17191..17520
|
Transposase IS3/IS911 family protein n=2 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGW6_SPHWW
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AJA09565.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transposase IS3/IS911 family protein; K07483 transposase
|
|
SCNpilot_expt_500_bf_scaffold_917_18
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17697..18239
|
Integrase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HH02_9SPHN
ISCc3, transposase OrfB {ECO:0000313|EMBL:AJA09564.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transposase, orfB
|
|
SCNpilot_expt_500_bf_scaffold_917_19
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18332..18658)
|
Putative ferredoxin n=1 Tax=Sphingopyxis macrogoltabida RepID=Q5F4D7_SPHMC
Ferredoxin, 2Fe-2S {ECO:0000313|EMBL:AJA09563.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
ferredoxin, 2Fe-2S; K04755 ferredoxin, 2Fe-2S
|
|
SCNpilot_expt_500_bf_scaffold_917_20
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18688..19950)
|
Putative cytochrome P450 alkane hydroxylase CYP153A8 n=1 Tax=Sphingopyxis macrogoltabida RepID=Q5F4D6_SPHMC
rbh
Cytochrome P450 family protein {ECO:0000313|EMBL:AJA09562.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
cytochrome P450 family protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_21
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20138..20881
|
GntR family transcriptional regulator n=1 Tax=Henriciella marina RepID=UPI00036DA1BE
rbh
Regulatory protein GntR, HTH {ECO:0000313|EMBL:AJA09561.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
regulatory protein GntR
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_22
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20926..22068
|
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDG2_9SPHN
rbh
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:AJA09560.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
oxidoreductase, 2-nitropropane dioxygenas
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_23
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22093..23283
|
Putative nonspecific lipid-transfer protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDG0_9SPHN
rbh
Putative nonspecific lipid-transfer protein {ECO:0000313|EMBL:AJA09559.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
nonspecific lipid-transfer protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_24
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23280..23741
|
Uncharacterized protein n=2 Tax=Erythrobacter RepID=Q2N5F5_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:AJA09558.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein; K07068
|
|
SCNpilot_expt_500_bf_scaffold_917_25
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23749..24969
|
Putative acyl-CoA dehydrogenase family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N5F4_ERYLH
rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJA09557.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
acyl-CoA dehydrogenase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_26
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24969..26060
|
acyl-CoA dehydrogenase n=1 Tax=Henriciella marina RepID=UPI00036A420D
rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJA09556.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
acyl-CoA dehydrogenase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_917_27
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26119..27213
|
Acyl-CoA synthetase {ECO:0000313|EMBL:AJA09555.1}; EC=2.3.1.86 {ECO:0000313|EMBL:AJA09555.1};; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
acyl-CoA synthetase n=1 Tax=Henriciella marina RepID=UPI00037A0BB5
rbh
|