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SCNpilot_expt_500_bf_scaffold_5542

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5542_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..457)
DNA (456bp) protein (152aa)
Major facilitator transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W917_9SPHN
Major facilitator transporter {ECO:0000313|EMBL:ENY80163.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
major facilitator transporter
SCNpilot_expt_500_bf_scaffold_5542_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(488..2518)
DNA (2031bp) protein (677aa)
Acetoacetyl-CoA synthetase {ECO:0000313|EMBL:ENY80164.1}; EC=6.2.1.16 {ECO:0000313|EMBL:ENY80164.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acetoacetyl-CoA synthase (EC:6.2.1.16); K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16]
Acetoacetyl-CoA synthetase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPA6_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_5542_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5358..6431
DNA (1074bp) protein (358aa)
AraC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9Q3_9SPHN rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:ENY80166.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
AraC family transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_5542_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7052..8584
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VY48_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80167.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K06876 deoxyribodipyrimidine photolyase-related protein
SCNpilot_expt_500_bf_scaffold_5542_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8578..9321)
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W923_9SPHN rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENY80168.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_5542_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9391..9978)
DNA (588bp) protein (196aa)
LuxR family transcriptional regulator; K00936 [EC:2.7.3.-]
LuxR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPB3_9SPHN rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:ENY80169.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_5542_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10116..10433
DNA (318bp) protein (106aa)
GTP cyclohydrolase (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
GTP cyclohydrolase 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6S7_NOVAD
Displaying 7 items

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