ggKbase home page

SCNpilot_expt_500_bf_scaffold_2182

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2182_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1220
DNA (1218bp) protein (406aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] rbh
Adenylate/guanylate cyclase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGN8_9SPHN rbh
Adenylate/guanylate cyclase {ECO:0000313|EMBL:ENY82616.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2182_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1207..1971
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W513_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82617.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2182_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2149..3942
DNA (1794bp) protein (598aa)
Hemolysin activation/secretion protein-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG04_9SPHN rbh
Hemolysin activation/secretion protein-like protein {ECO:0000313|EMBL:ENY82618.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hemolysin activation/secretion protein-like protein rbh
SCNpilot_expt_500_bf_scaffold_2182_4
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3813..5576)
DNA (1764bp) protein (588aa)
Uncharacterized protein {ECO:0000313|EMBL:KEQ51887.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
SCNpilot_expt_500_bf_scaffold_2182_5
Eimeria praecox, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(6138..8897)
DNA (2760bp) protein (920aa)
Uncharacterized protein n=1 Tax=Eimeria praecox RepID=U6H6E8_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDI86299.1}; TaxID=51316 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria praecox.;"
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC
SCNpilot_expt_500_bf_scaffold_2182_6
unknown

Not on your lists

comp(9029..9253)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2182_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10275..11381
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GW99_SPHAL rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA07812.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2182_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11422..12888
DNA (1467bp) protein (489aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
Cysteine--tRNA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW01_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_2182_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12996..13955
DNA (960bp) protein (320aa)
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGP4_9SPHN rbh
D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:ENY82621.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
D-isomer specific 2-hydroxyacid dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_2182_10
unknown

Not on your lists

15091..15729
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2182_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15675..17612)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWK0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82624.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2182_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17623..18516)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW07_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82625.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2182_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18516..20951)
DNA (2436bp) protein (812aa)
Cyclic nucleotide-binding protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGP8_9SPHN rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ENY82626.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cyclic nucleotide-binding protein rbh
SCNpilot_expt_500_bf_scaffold_2182_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21206..21979)
DNA (774bp) protein (258aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
arginyl-tRNA-protein transferase; K00685 arginine-tRNA-protein transferase [EC:2.3.2.8] rbh
Putative arginyl-tRNA--protein transferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W525_9SPHN rbh
Displaying 14 items

View Taxonomy