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SCNpilot_expt_500_bf_scaffold_2183

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2183_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..307)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2T5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81847.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2183_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(383..2110)
DNA (1728bp) protein (576aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] rbh
ATP-dependent DNA helicase RecQ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDN4_9SPHN rbh
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ENY81848.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2183_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2172..2642)
DNA (471bp) protein (157aa)
Putative transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLU5_9SPHN
Inner membrane protein {ECO:0000313|EMBL:AJA10653.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
cation:proton antiporter; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_expt_500_bf_scaffold_2183_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2795..3205
DNA (411bp) protein (137aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_expt_500_bf_scaffold_2183_5
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3414..3725)
DNA (312bp) protein (104aa)
Putative potassium-efflux system protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VNE9_9SPHN
putative transporter; K03455 monovalent cation:H+ antiporter-2, CPA2 family
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_expt_500_bf_scaffold_2183_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4103..5917)
DNA (1815bp) protein (605aa)
ABC transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU82_9SPHN rbh
ABC transporter {ECO:0000313|EMBL:ENY81849.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_expt_500_bf_scaffold_2183_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6049..7269)
DNA (1221bp) protein (407aa)
polyhydroxyalkanoate depolymerase; K05973 poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] rbh
Polyhydroxyalkanoate depolymerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTQ9_9SPHN rbh
Polyhydroxyalkanoate depolymerase {ECO:0000313|EMBL:ENY81850.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2183_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7649..9451
DNA (1803bp) protein (601aa)
ABC transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEH0_9SPHN rbh
ABC transporter {ECO:0000313|EMBL:ENY81851.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_expt_500_bf_scaffold_2183_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9454..9993
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2U0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81852.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09983 hypothetical protein
SCNpilot_expt_500_bf_scaffold_2183_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10034..10540)
DNA (507bp) protein (169aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDN9_9SPHN
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ENY81853.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
biopolymer transport protein ExbD/TolR
SCNpilot_expt_500_bf_scaffold_2183_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10726..11841)
DNA (1116bp) protein (372aa)
OmpA/MotB protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU87_9SPHN rbh
OmpA/MotB protein {ECO:0000313|EMBL:ENY81854.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
OmpA/MotB protein rbh
SCNpilot_expt_500_bf_scaffold_2183_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11971..12384)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTR3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81855.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2183_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12351..14477)
DNA (2127bp) protein (709aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEH6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81856.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2183_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14479..14850)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2U5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81857.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2183_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14885..15718)
DNA (834bp) protein (278aa)
Phage protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDP4_9SPHN rbh
Phage protein {ECO:0000313|EMBL:ENY81858.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
phage protein rbh
SCNpilot_expt_500_bf_scaffold_2183_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15712..18018)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU93_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81859.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2183_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18520..18729)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEI0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81861.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2183_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18731..19045)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2U9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81862.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2183_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19042..19449)
DNA (408bp) protein (136aa)
TP901-1 family phage major tail protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDP8_9SPHN
TP901-1 family phage major tail protein {ECO:0000313|EMBL:ENY81863.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Phage major tail protein, TP901-1
SCNpilot_expt_500_bf_scaffold_2183_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19499..19834
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU97_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81864.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
Displaying 20 items

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