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SCNpilot_expt_500_bf_scaffold_1540_5

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(1769..4276)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 834.0
  • Bit_score: 1177
  • Evalue 0.0
  • rbh
DNA ligase D n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCZ2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 835.0
  • Bit_score: 1648
  • Evalue 0.0
  • rbh
DNA ligase D {ECO:0000313|EMBL:ENY81351.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 835.0
  • Bit_score: 1648
  • Evalue 0.0

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2508
ATGACCCGTGCCGACCCTCTCGCCCAATATAACAAGAAGCGCGATTTCAAGTTGACCCCCGAACCCGCGGGCAAGGTCGCGAAAGGCTTCGGCAATCGCTTCATCGTCCAGAAACACGACGCGACGCGGCTCCATTACGATTTCCGCCTCGAAGTCGATGGCGTGCTCAAAAGCTGGGCGGTGACGCGGGGGCCGAGCGCGAACCCCGCCTATAAGCGGCTCGCGGTACGAACCGAGGACCATCCGATGGCCTATGCCGATTTCGAAGGCGTCATTCCCAAGGGCGAATATGGCGGCGGTTCGGTGATGCTGTGGGATCGCGGCACCTGGGCGCCGGTCGCGGGGAAGAGCGCGAAGGATATGGAAAAGGGCCATCTTCACTTCACCCTCGACGGCGAGCGGATGAAGGGCGAATGGCTGCTCGTCCGCATGAAGCCCCGCGCCGGCGAAAAGCGCGAAAACTGGCTGCTCCGCAAGATCGACGACGCCTATGCGGGGGGCAGCGACGACTTGACCGGCCGCTACCTCACCAGCGTCCTCACCGACCGCCCCATGGCCGAGATCGCGGGCGACGAAGGCGGCGAGCAATCGCTGAAGGGCGCAAAGGGCGAAGCCTTCGCGAAGAAGATGGCGGCCGCGGCGGCGCATAACCGCAAGGTCGCCAAAAGCTCGAAGCGCGGCACCAAGCCGCCGAAGTTCCGCAAACTCCAGCTGGCGACGCTCGTCGACAGCGTGCCGGCCGGCAACAACTGGTTCTACGAGATCAAGTTCGACGGTTATCGCGCGCTCGTCGCCGCGGCGGGGGATCAGGTCGTCGTCTATACGCGCAGCGGGCTCGACTGGACCGACAAGTTCGCCCCGCTAGCGCGCCATATCGCCGCGCTCGACCTGCCGCCGTGCCTGATCGACGGTGAGATCGTCGCCTATGGCAAGGACGGCAACCCCGACTTCTCGGCGCTCCAGGCAGTTCTCAAGCGAGGCCATGGCGCGCAGGACGAGGCGACCGACCTCCACCTCTTCGCCTTCGACCTGCTCGAAGAGAACGGAAAATCGCTGACCGCACTCGGCAATCTAGAACGCAAGGAACGTCTCGAGGCGCTGCTCCGCGATGCGGCGCCGCCGATTGCGGTCGCCGATCATGTCATCGGCGCGGGCGAAACGCTCTATGAGGCGATGTGCGGCGCAGGGCAGGAGGGCATCATCGCCAAGCGCGCCGATGCGCCCTACGCCGGCCGCCGGTCGAAAAACTGGGTGAAGGTCAAATGCACCCGCCGCCAGGAATTCATCATCGTCGGCTGGAAGGAGAGTTCGGCGAAGGCACGTCCCTTCGCCTCGCTACTCCTCGCGCAGCGCGAAAAGGGTGAACTCGTCTATAAGGGCAATGTCGGCACCGGCTTCGATGCCGATACGATGGCGATGCTCGCGGCGAAATTCGCGGGCCGCGCGCGCAAGACTGCGCCGGTCGAGGTCGACAAGGTGGCGGCGCGCAAGGTCCATTGGGTAAAGCCCGACCTTGTCGCCGAGATCGCCTTCGCCGAATATACCGCCGGCGGCTCGGTCCGCCACGCGAGCTTCGTCGGGCTGCACGCCGACAAGGAGGCGAAGGACGTGAAACCCGAAACCAAGGCCAAGGCTCCCGCCCCGGTCAGCGACGTGAAGATCAGCAGCCGCGAGCGCGTCATCTTCCCCGAGGCAAAGGCGACGAAGGGCGACCTCGCCGACTATTATGCCGCCGTCGCGCCGATAATGCTGCCGCATCTCGCCCGCCGCCCGGCCAGCCTGGTCCGCTGTCCGCAGGGACGCGCCAAGCAATGCTTCTTCCAGAAGCATGATTCAGGCTCTTTCGGCCCGCACGTCCACCACGTTCCGATCGAAGAGAAGGACGGCGGCGTTGAGGATTATCTCTATGTCGAGGATGCGGACGGCATCCTCGCCTGCGTCCAGATGGGGACGATCGAATTTCACGGCTGGGGCAGCCACGTCGATACGCTCGAACAGCCGGACCGCATGGTCTTCGACCTCGACCCCGACGAAGGGCTCGACTTCGCCGACGTCAAAAAGGCCGCAGCGGATTTGAAGCGCCAACTCGCCGACATCGGCCTCGTCAGCTTTGCCATGCTCTCGGGCGGCAAGGGCGTCCATGTTGTCGTGCCGCTCGATCCGGGGCACAGCTGGGACGCGCACAAGGATTTTGCGAAGCGCTTTGCCGAGGCGATGAGCCTTGCCGAACCCGATCGTTTCGTCGCGACGATGAGCAAGGCAAAGCGCAAGGGAAAGATCTTCATCGACTGGCTGCGCAACCAGCGCGGCAGCACCGCAATCATGCCCTATTCGGCGCGCGCGCGGGCGGGGGCGCCGGTGGCGGTTCCCATCGATTGGGACGGGCTGGCCGCCATCGACAGCGCGCGCCACTGGACGATCGCAGACGCCCGCGCCTTGCTCGATCGCGCCGCGAGCCCCACGCTGAAGGGATGGGGATTTGCGCGGCAGGCGCTGCCCGCGATCTGA
PROTEIN sequence
Length: 836
MTRADPLAQYNKKRDFKLTPEPAGKVAKGFGNRFIVQKHDATRLHYDFRLEVDGVLKSWAVTRGPSANPAYKRLAVRTEDHPMAYADFEGVIPKGEYGGGSVMLWDRGTWAPVAGKSAKDMEKGHLHFTLDGERMKGEWLLVRMKPRAGEKRENWLLRKIDDAYAGGSDDLTGRYLTSVLTDRPMAEIAGDEGGEQSLKGAKGEAFAKKMAAAAAHNRKVAKSSKRGTKPPKFRKLQLATLVDSVPAGNNWFYEIKFDGYRALVAAAGDQVVVYTRSGLDWTDKFAPLARHIAALDLPPCLIDGEIVAYGKDGNPDFSALQAVLKRGHGAQDEATDLHLFAFDLLEENGKSLTALGNLERKERLEALLRDAAPPIAVADHVIGAGETLYEAMCGAGQEGIIAKRADAPYAGRRSKNWVKVKCTRRQEFIIVGWKESSAKARPFASLLLAQREKGELVYKGNVGTGFDADTMAMLAAKFAGRARKTAPVEVDKVAARKVHWVKPDLVAEIAFAEYTAGGSVRHASFVGLHADKEAKDVKPETKAKAPAPVSDVKISSRERVIFPEAKATKGDLADYYAAVAPIMLPHLARRPASLVRCPQGRAKQCFFQKHDSGSFGPHVHHVPIEEKDGGVEDYLYVEDADGILACVQMGTIEFHGWGSHVDTLEQPDRMVFDLDPDEGLDFADVKKAAADLKRQLADIGLVSFAMLSGGKGVHVVVPLDPGHSWDAHKDFAKRFAEAMSLAEPDRFVATMSKAKRKGKIFIDWLRNQRGSTAIMPYSARARAGAPVAVPIDWDGLAAIDSARHWTIADARALLDRAASPTLKGWGFARQALPAI*