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SCNpilot_expt_500_bf_scaffold_1540_6

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(4433..5293)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein EBMC1_09869 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1K0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 286.0
  • Bit_score: 550
  • Evalue 9.40e-154
  • rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 286.0
  • Bit_score: 550
  • Evalue 1.30e-153
Ku family containing protein; K10979 DNA end-binding protein Ku similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 287.0
  • Bit_score: 419
  • Evalue 7.90e-115
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGGTGCAACGCGCCTATTGGAAGGGTCAGATCCGCCTCGCTTTGGTGTCGATCCCGGTCGAAATCTATCCGGCAACCAAATCGGGGGCGAGCGTCAGCTTTCGCCAGATCCACGAACCGAGCGGCAAACCGGTCAAATATGAAAAGGTCGTACCCGGCATCGGCGCCATCGATACCGATGATATCGTCAAGGGCTATGAGGTGTCGAAGGGCAACTATGTCCTGCTCGACGAAGAAGAGATCGAGGCGGTCAAGCTGGAGAGCAAGCGGACGCTCGAGCTGGTCCAATTCGTCGACGCGAGCGACATCGACATCCTCTATTATGAAAAGCCCTATTATGTCGTCCCCGCCGACGATCTGGCCGAGGAAGCCTATATCGTCCTGCGCGAAGCGCTGCGGCGAACGAAGAAGGTGGGGCTGGGGCAGCTTGCGCTGCGCGGTCAGGAGCAGCTCGTCGGGCTGCGTCCCTGCGGCAAGGGGCTGGTGCTCGAAGTGCTGCGCTATGCCGAGGAAGTGAGCAAGGCCGCCAGCTATTTCCGCGACGTGCCCGCGAGCAAGCCCGACGCCGACCTGCTCGATCTCGCCGAAACGCTGATCGACAAGAAGAGCGGCAAGTTCGACGCCGCCGACTATCACAATCACTATGTCGATGCGCTGAAGCGCGTCATCGCCAAGAAAGCGAAAGCCAAGGGCAAGCGCGTGCTCGAGGATGTCGGGGAGCCCGCCGATGTGCGCGAAGGATCGAATGTCATTGATCTGATGGCAGCGCTCAAGGCGTCGGTCGACGGCAAGAAAACGGCCGCCGCTGCGACGAAGAAGAAGGCGCCCGCCAAAAAGGCGCCGACGAAAAAGCGGGCATAG
PROTEIN sequence
Length: 287
MVQRAYWKGQIRLALVSIPVEIYPATKSGASVSFRQIHEPSGKPVKYEKVVPGIGAIDTDDIVKGYEVSKGNYVLLDEEEIEAVKLESKRTLELVQFVDASDIDILYYEKPYYVVPADDLAEEAYIVLREALRRTKKVGLGQLALRGQEQLVGLRPCGKGLVLEVLRYAEEVSKAASYFRDVPASKPDADLLDLAETLIDKKSGKFDAADYHNHYVDALKRVIAKKAKAKGKRVLEDVGEPADVREGSNVIDLMAALKASVDGKKTAAAATKKKAPAKKAPTKKRA*