name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_30_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
299..898
|
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ05_9SPHI
|
|
SCNpilot_expt_1000_bf_scaffold_30_2
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(998..1840)
|
MscS Mechanosensitive ion channel n=1 Tax=Niabella soli DSM 19437 RepID=H1NKW8_9SPHI
rbh
Mechanosensitive ion channel protein {ECO:0000313|EMBL:KGO97069.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
small-conductance mechanosensitive channel; K03442 small conductance mechanosensitive channel
|
|
SCNpilot_expt_1000_bf_scaffold_30_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(1999..2754)
|
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
rbh
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEW02306.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEW02306.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U9_NIAKG
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_30_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2811..3761)
|
Phytanoyl-CoA dioxygenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU7_NIAKG
rbh
Phytanoyl-CoA dioxygenase
rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:AEV98542.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3763..5271)
|
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V0_NIAKG
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEW02307.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5461..6276)
|
sulfate-transporting ATPase; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
rbh
Sulfate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V1_NIAKG
rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO42052.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
6337..7335
|
5,10-methylenetetrahydrofolate reductase (NAD(P)); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
rbh
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Methylenetetrahydrofolate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V2_NIAKG
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_30_8
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria
|
Not on your lists |
7357..8358
|
hypothetical protein VspiD_28515 id=4436996 bin=GWF2_Lentisphaerae_49_21 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rbh
hypothetical protein
rbh
Tax=GWF2_Lentisphaerae_49_21_curated
|
|
SCNpilot_expt_1000_bf_scaffold_30_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8382..10538)
|
Planctomycete cytochrome C n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW67_DYAFD
rbh
cytochrome C
rbh
Planctomycete cytochrome C {ECO:0000313|EMBL:ACT93199.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(10555..12009)
|
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW68_DYAFD
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT93200.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12046..14370)
|
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIZ6_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37010.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_12
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(14557..15828)
|
Putative uncharacterized protein id=3355116 bin=GWF2_Bacteroidetes_41_9 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
|
|
SCNpilot_expt_1000_bf_scaffold_30_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
15994..16449
|
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363D886
Uncharacterized protein {ECO:0000313|EMBL:GAO43532.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_30_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
16727..17053
|
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3I8_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52965.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(17111..18115)
|
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855, ECO:0000256|SAAS:SAAS00181223};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
D-fructose 1,6-bisphosphatase; K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11]
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGK5_NIAKG
|
|
SCNpilot_expt_1000_bf_scaffold_30_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(18255..21335)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AC5DF
rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ23774.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
glycoside hydrolase family protein
|
|
SCNpilot_expt_1000_bf_scaffold_30_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(21487..22923)
|
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000378C320
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_30_18
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22957..25728)
|
Alpha-L-rhamnosidase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YER3_9SPHI
rbh
Alpha-L-rhamnosidase {ECO:0000313|EMBL:EHQ30823.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
alpha-L-rhamnosidase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_30_19
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(25839..28976)
|
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y047_PEDHD
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU04759.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_20
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
29281..30177
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BAC5A
rbh
AraC family transcriptional regulator
rbh
AraC protein arabinose-binding/dimerisation {ECO:0000313|EMBL:ACU04635.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_21
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
30637..33765
|
TonB-denpendent receptor n=1 Tax=Rudanella lutea RepID=UPI00035C0DE1
rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI51835.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
TonB-dependent receptor plug
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_30_22
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
33777..35285
|
RagB/SusD domain-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBT8_RUNSL
rbh
RagB/SusD domain-containing protein
rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEI51834.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(35865..38309)
|
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFM3_NIAKG
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEV99462.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_24
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria
|
Not on your lists |
comp(38662..39606)
|
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GC34_9BACT
rbh
monosaccharide-transporting ATPase; K10439 ribose transport system substrate-binding protein
rbh
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_30_25
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria
|
Not on your lists |
comp(39956..40888)
|
Inner-membrane translocator n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QJX7_SPILD
rbh
inner-membrane translocator; K10440 ribose transport system permease protein
rbh
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_30_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(40986..42473)
|
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ABC transporter related protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GC32_9BACT
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_30_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(42868..43797)
|
Xylose isomerase domain protein TIM barrel n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRJ5_DYAFD
rbh
xylose isomerase domain-containing protein
rbh
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT92698.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_28
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(43802..45070)
|
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTT3_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03719.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(45756..46727)
|
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KM53_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41396.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
|
|
SCNpilot_expt_1000_bf_scaffold_30_30
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(46938..47876)
|
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037178AC
Uncharacterized protein {ECO:0000313|EMBL:CDE85639.1}; TaxID=1262865 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
hypothetical protein
|