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SCNpilot_expt_1000_bf_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 479 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_143_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(499..2472)
DNA (1974bp) protein (658aa)
sulfatase n=1 Tax=Empedobacter brevis RepID=UPI00036E5571 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO42624.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
sulfatase rbh
SCNpilot_expt_1000_bf_scaffold_143_2
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2830..4113)
DNA (1284bp) protein (428aa)
Histidine kinase A domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUP0_9SPHI
Histidine kinase {ECO:0000313|EMBL:AIM37534.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_143_3
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4110..4784)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2S6_9FLAO rbh
Transcriptional regulator {ECO:0000313|EMBL:AIM37533.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
winged helix family two component transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_143_4
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5149..6126)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HRW5_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ58020.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
Na(+)/phosphate symporter; K03324 phosphate:Na+ symporter
SCNpilot_expt_1000_bf_scaffold_143_5
unknown

Not on your lists

comp(6579..6884)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_143_6
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6905..7960)
DNA (1056bp) protein (352aa)
ABC-2 type transporter n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7H8_9FLAO rbh
ABC transporter permease {ECO:0000313|EMBL:KGO95840.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
ABC-2 type transporter rbh
SCNpilot_expt_1000_bf_scaffold_143_7
unknown

Not on your lists

comp(7902..8147)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_143_8
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8158..9261)
DNA (1104bp) protein (368aa)
ABC-2 type transporter n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S0W1_9FLAO rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:KIC61316.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_143_9
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9425..10261)
DNA (837bp) protein (279aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GP37_9SPHI rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOR93597.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_143_10
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10327..11241)
DNA (915bp) protein (305aa)
ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S107_9FLAO rbh
ATPase {ECO:0000313|EMBL:KIC61297.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
multidrug ABC transporter ATPase rbh
SCNpilot_expt_1000_bf_scaffold_143_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11321..11680)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035C94AD
Uncharacterized protein {ECO:0000313|EMBL:EGK01609.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_12
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11804..12868)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PVE6_9FLAO rbh
Secretion protein {ECO:0000313|EMBL:KIC61298.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein; K01993 HlyD family secretion protein rbh
SCNpilot_expt_1000_bf_scaffold_143_13
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12887..14176)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 324 str. F0483 RepID=L1PGS8_9FLAO rbh
Transporter {ECO:0000313|EMBL:KIC61317.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
outer membrane efflux protein rbh
SCNpilot_expt_1000_bf_scaffold_143_14
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14215..14841)
DNA (627bp) protein (209aa)
TetR family transcriptional regulator n=1 Tax=Capnocytophaga cynodegmi RepID=UPI0003687F45 rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEN39034.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_143_15
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15814..16479
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA91885.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
SCNpilot_expt_1000_bf_scaffold_143_16
unknown

Not on your lists

comp(16547..16774)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F0D7E
SCNpilot_expt_1000_bf_scaffold_143_17
unknown

Not on your lists

comp(16787..17683)
DNA (897bp) protein (299aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_143_18
unknown

Not on your lists

comp(17758..17943)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_143_19
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17918..18262)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000318960F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESU28704.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
SCNpilot_expt_1000_bf_scaffold_143_20
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18268..19320)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KXZ0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF17736.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_21
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19356..20507)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1ALA4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJG03144.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_22
unknown

Not on your lists

comp(20563..21369)
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_143_23
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21350..22210)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT4_ZUNPS
Conjugative transposon protein TraN {ECO:0000313|EMBL:KGO80815.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22238..23569)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT3_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KIC89818.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_25
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23599..24081)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT2_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KGO80813.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24084..24689)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003825A16
Conjugal transfer protein {ECO:0000313|EMBL:KIC89820.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_27
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24732..25949)
DNA (1218bp) protein (406aa)
TraJ family protein conjugative transposon n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT0_ZUNPS
Conjugal transfer protein TraJ {ECO:0000313|EMBL:KGO80811.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
TraJ family protein conjugative transposon
SCNpilot_expt_1000_bf_scaffold_143_28
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25960..26586)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C17DA
Uncharacterized protein {ECO:0000313|EMBL:KIA95593.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_29
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26592..27212)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS8_ZUNPS
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54342.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_143_30
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27223..27894)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037148FF
hypothetical protein
Conjugal transfer protein TraI {ECO:0000313|EMBL:KGO80808.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
Displaying items 1-30 of 479 in total

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