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SCNpilot_expt_1000_bf_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_154_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

373..1128
DNA (756bp) protein (252aa)
Thrombospondin type 3 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB61_NIAKG
thrombospondin type 3 repeat-containing protein
Thrombospondin type 3 repeat-containing protein {ECO:0000313|EMBL:AEW02444.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_154_2
unknown

Not on your lists

1392..1763
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_154_3
unknown

Not on your lists

2121..2588
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_154_4
unknown

Not on your lists

2828..3163
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_154_5
bacterium UASB14, Bacteria

Not on your lists

3386..3901
DNA (516bp) protein (172aa)
translocation protein TolB n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
WD40-like Beta Propeller {ECO:0000313|EMBL:GAK52271.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
tolB; protein tolB
SCNpilot_expt_1000_bf_scaffold_154_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4021..4635
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCQ5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03509.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_154_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4873..5277)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLR8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17308.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_154_8
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5411..7957
DNA (2547bp) protein (849aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T1G6_META2 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAL83323.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_154_9
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7967..8842
DNA (876bp) protein (292aa)
transglutaminase n=1 Tax=Methylomicrobium buryatense RepID=UPI0003486C1A rbh
Protein containing transglutaminase-like domain {ECO:0000313|EMBL:GAL83322.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_154_10
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8948..11014)
DNA (2067bp) protein (689aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
sufS; selenocysteine lyase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase / L-selenocysteine selenide-lyase (L-alanine-forming) n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11U32_CYTH3
SCNpilot_expt_1000_bf_scaffold_154_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10995..11918)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBP2_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU63106.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_154_12
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12366..13799
DNA (1434bp) protein (478aa)
Phytoene dehydrogenase n=1 Tax=Pedobacter sp. BAL39 RepID=A6E7P6_9SPHI rbh
Phytoene dehydrogenase {ECO:0000313|EMBL:EDM38932.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
FAD dependent oxidoreductase rbh
SCNpilot_expt_1000_bf_scaffold_154_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14214..15302
DNA (1089bp) protein (363aa)
glycoside hydrolase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003732935 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC95994.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
glycoside hydrolase rbh
SCNpilot_expt_1000_bf_scaffold_154_14
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15367..16209)
DNA (843bp) protein (281aa)
Serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Putative uncharacterized protein id=1871433 bin=GWE2_Bacteroidetes_32_14 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
Tax=RBG_13_Bacteroidetes_46_8_curated
SCNpilot_expt_1000_bf_scaffold_154_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16330..17211)
DNA (882bp) protein (294aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
cysM; cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47] rbh
Cysteine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKT4_CHIPD rbh
SCNpilot_expt_1000_bf_scaffold_154_16
unknown

Not on your lists

comp(17221..17406)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_154_17
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17434..19998)
DNA (2565bp) protein (855aa)
TonB-dependent receptor n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RQP0_LEAB4 rbh
TonB-dependent receptor {ECO:0000313|EMBL:ADQ17496.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
tonb-dependent receptor rbh
SCNpilot_expt_1000_bf_scaffold_154_18
unknown

Not on your lists

comp(20218..20484)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_154_19
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20864..21466)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AJF9_FLELS
Uncharacterized protein {ECO:0000313|EMBL:KFF17798.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_154_20
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21646..22440)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EE95_RUNSL
short-chain dehydrogenase/reductase SDR; K07124
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEI46750.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_154_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22446..23357)
DNA (912bp) protein (304aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKW3_9BACT rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:CCH54539.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
phytanoyl-CoA dioxygenase rbh
SCNpilot_expt_1000_bf_scaffold_154_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24354..25430
DNA (1077bp) protein (359aa)
sterol desaturase n=1 Tax=Dyadobacter beijingensis RepID=UPI00037A4A2A rbh
fatty acid hydroxylase rbh
Fatty acid hydroxylase {ECO:0000313|EMBL:ACT95708.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_154_23
Robiginitalea biformata, Robiginitalea, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25638..28709
DNA (3072bp) protein (1024aa)
Putative outer membrane protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CMA8_ROBBH rbh
outer membrane protein rbh
Putative outer membrane protein {ECO:0000313|EMBL:EAR14800.1}; TaxID=313596 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Robiginitalea.;" source="Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146).;"
SCNpilot_expt_1000_bf_scaffold_154_24
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28720..30174
DNA (1455bp) protein (485aa)
SusD/RagB family lipoprotein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L5I6_ZOBGA rbh
SusD/RagB family lipoprotein rbh
SusD/RagB family lipoprotein {ECO:0000313|EMBL:CAZ96302.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
SCNpilot_expt_1000_bf_scaffold_154_25
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30161..31726
DNA (1566bp) protein (522aa)
Sulfatase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSM1_PEDHD
Sulfatase {ECO:0000313|EMBL:KIA94110.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
sulfatase
SCNpilot_expt_1000_bf_scaffold_154_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31761..33353
DNA (1593bp) protein (531aa)
sulfatase n=1 Tax=Dyadobacter beijingensis RepID=UPI000373323D
sulfatase
Sulfatase {ECO:0000313|EMBL:ACT93455.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_154_27
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33380..34786
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035CD253
Sulfatase family protein {ECO:0000313|EMBL:EAZ82500.2}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
sulfatase rbh
SCNpilot_expt_1000_bf_scaffold_154_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34954..35553
DNA (600bp) protein (200aa)
Beta-propeller domain-containing protein, methanol dehydrogenase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KS78_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94348.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
beta-propeller domain-containing protein, methanol dehydrogenase
SCNpilot_expt_1000_bf_scaffold_154_29
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35831..38554
DNA (2724bp) protein (908aa)
Type III restriction protein res subunit n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4J1_9SPHI rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:KIA91164.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_154_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38760..39206
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBS0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98202.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 119 in total

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