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SCNpilot_expt_1000_bf_scaffold_169

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_169_1
unknown

Not on your lists

258..899
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_169_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1253..2674
DNA (1422bp) protein (474aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter soli
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ50_NIAKG
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
SCNpilot_expt_1000_bf_scaffold_169_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2677..3942
DNA (1266bp) protein (422aa)
Transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ49_NIAKG
Putative Fis family transcriptional regulator {ECO:0000313|EMBL:GAO44374.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_169_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3926..4447
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ48_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90126.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_169_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4461..5579
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ47_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97564.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_169_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5581..5940
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DD7AD
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KIC93633.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
SCNpilot_expt_1000_bf_scaffold_169_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6076..7098
DNA (1023bp) protein (341aa)
Aminodeoxychorismate lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ45_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC93632.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
aminodeoxychorismate lyase; K07082 UPF0755 protein rbh
SCNpilot_expt_1000_bf_scaffold_169_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7112..8068
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003811055 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO44369.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ribonuclease BN; K07058 membrane protein
SCNpilot_expt_1000_bf_scaffold_169_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8312..10024
DNA (1713bp) protein (571aa)
FAD dependent oxidoreductase; K09835 prolycopene isomerase [EC:5.2.1.13]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003646684
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KIC94890.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_169_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10282..11388)
DNA (1107bp) protein (369aa)
Beta-lactamase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QDZ8_SPILD
Uncharacterized protein {ECO:0000313|EMBL:GAO41744.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
beta-lactamase
SCNpilot_expt_1000_bf_scaffold_169_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11521..11829)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E4735
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_169_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11891..13162)
DNA (1272bp) protein (424aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ88_9SPHI
2-methylthioadenine synthetase {ECO:0000313|EMBL:KIC92726.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
MiaB-like tRNA modifying enzyme
SCNpilot_expt_1000_bf_scaffold_169_13
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13238..14281)
DNA (1044bp) protein (348aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036279CD
SCNpilot_expt_1000_bf_scaffold_169_14
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14341..15204)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036B3CF8
esterase; K07017
Esterase {ECO:0000313|EMBL:ADZ77851.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_169_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15491..16162
DNA (672bp) protein (224aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG08_9SPHI
ABC transporter related protein {ECO:0000313|EMBL:EHQ26296.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
phosphonate-transporting ATPase
SCNpilot_expt_1000_bf_scaffold_169_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16191..17636
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368CD2C
Transporter {ECO:0000313|EMBL:KIC93720.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
tolC; outer membrane efflux protein; K12340 outer membrane channel protein rbh
SCNpilot_expt_1000_bf_scaffold_169_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17731..20562
DNA (2832bp) protein (944aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] rbh
Peptidase M16 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP4_NIAKG rbh
Peptidase M16 domain protein {ECO:0000313|EMBL:AEW00791.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_169_18
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20671..22056)
DNA (1386bp) protein (462aa)
aminopeptidase; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] rbh
Putative aminopeptidase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BK45_ZUNPS rbh
Putative aminopeptidase {ECO:0000313|EMBL:ADF51725.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_expt_1000_bf_scaffold_169_19
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22155..23135)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3B415 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA96937.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_169_20
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23164..23847)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B7727F
Uncharacterized protein {ECO:0000313|EMBL:CDS93557.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_169_21
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23894..25630)
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B65D82 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA96936.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
RagB/SusD domain-containing protein
SCNpilot_expt_1000_bf_scaffold_169_22
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25654..28800)
DNA (3147bp) protein (1049aa)
membrane protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B41733 rbh
Putative outer membrane protein {ECO:0000313|EMBL:CDS93563.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
TonB-dependent receptor plug rbh
SCNpilot_expt_1000_bf_scaffold_169_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29910..31160)
DNA (1251bp) protein (417aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
FAD dependent oxidoreductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAN4_CHIPD
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KIC93679.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_169_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31640..34006
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KU07_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KIC96504.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K09955 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_169_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

34096..36375
DNA (2280bp) protein (760aa)
peptidase S9 n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5A44D rbh
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_169_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36597..39011)
DNA (2415bp) protein (805aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPL9_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:ACU62429.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein; K09955 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_169_27
unknown

Not on your lists

comp(39240..40130)
DNA (891bp) protein (297aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_169_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40184..41377)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQQ1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94162.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_169_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41408..42256)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C38C7
GMP synthase {ECO:0000313|EMBL:KIC91416.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
GMP synthase
SCNpilot_expt_1000_bf_scaffold_169_30
unknown

Not on your lists

comp(42291..42416)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying items 1-30 of 105 in total

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