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SCNpilot_expt_1000_bf_scaffold_522

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_522_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(202..786)
DNA (585bp) protein (195aa)
Twin-arginine translocation pathway signal n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB94_NIAKG
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:KIC89775.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
twin-arginine translocation pathway signal
SCNpilot_expt_1000_bf_scaffold_522_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(830..2605)
DNA (1776bp) protein (592aa)
GMC family oxidoreductase n=1 Tax=Niabella aurantiaca RepID=UPI000367FB03 rbh
GMC family oxidoreductase {ECO:0000313|EMBL:AHF14184.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glucose-methanol-choline oxidoreductase
SCNpilot_expt_1000_bf_scaffold_522_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2670..3575)
DNA (906bp) protein (302aa)
xylose isomerase domain-containing protein; K01816 hydroxypyruvate isomerase [EC:5.3.1.22] rbh
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB97_NIAKG rbh
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEW02480.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_522_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3836..4969
DNA (1134bp) protein (378aa)
Oxidoreductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB99_NIAKG
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEW02482.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_522_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5102..6157
DNA (1056bp) protein (352aa)
AP endonuclease 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBA0_NIAKG
AP endonuclease 2 domain protein
AP endonuclease 2 domain protein {ECO:0000313|EMBL:AEW02483.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_522_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6222..6659
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036F19DB
Cytochrome c class I {ECO:0000313|EMBL:KIC92978.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cytochrome c class I
SCNpilot_expt_1000_bf_scaffold_522_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6666..7382
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBA3_NIAKG
Glycosyl hydrolase {ECO:0000313|EMBL:KIC89785.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_522_8
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7677..9131
DNA (1455bp) protein (485aa)
ina; M6 family metalloprotease domain-containing protein (EC:3.4.24.-) rbh
M6 family metalloprotease domain-containing protein {ECO:0000313|EMBL:CCH02240.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCH02240.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
M6 family metalloprotease domain-containing protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KDN7_9BACT rbh
SCNpilot_expt_1000_bf_scaffold_522_9
unknown

Not on your lists

9182..9463
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_522_10
unknown

Not on your lists

comp(9502..9714)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_522_11
unknown

Not on your lists

9745..10338
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_522_12
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10363..10875
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3Z069_AEQSU
Uncharacterized conserved protein {ECO:0000313|EMBL:GAL62586.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_522_13
unknown

Not on your lists

comp(10883..11089)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_522_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11438..12547)
DNA (1110bp) protein (370aa)
glucose-fructose oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036A462B rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT95954.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_522_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12640..13077
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKY1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14374.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_522_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13127..14713)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCG2_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02502.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_522_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15181..16602
DNA (1422bp) protein (474aa)
23S rRNA m(5)U-1939 methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:AEW02296.1}; EC=2.1.1.- {ECO:0000313|EMBL:AEW02296.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7P1_NIAKG
SCNpilot_expt_1000_bf_scaffold_522_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

16755..17471
DNA (717bp) protein (239aa)
Uncharacterized protein id=3963156 bin=GWF2_Bacteroidetes_41_31 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_522_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17508..18431
DNA (924bp) protein (308aa)
Rhomboid family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7N9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC95239.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
rhomboid family protein
SCNpilot_expt_1000_bf_scaffold_522_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18645..19589
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379F698
endonuclease/exonuclease/phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_522_21
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19671..21167
DNA (1497bp) protein (499aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Cysteine--tRNA ligase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1A0_SPHS2 rbh
SCNpilot_expt_1000_bf_scaffold_522_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21232..21822
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M2_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02277.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_522_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22022..22600
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIG9_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58158.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_522_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22715..24034)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMM7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89703.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_522_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24212..24793)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BEA20
Uncharacterized protein {ECO:0000313|EMBL:KIC89705.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_522_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24855..25082)
DNA (228bp) protein (76aa)
Transcriptional regulator, XRE family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBR9_CHIPD
XRE family transcriptional regulator; K07727 putative transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACU63133.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_522_27
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25086..25622)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JHA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68200.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_522_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25821..26459)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96057.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_522_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26576..27919)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365DF92
Uncharacterized protein {ECO:0000313|EMBL:GAO41835.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
gliding motility-associated protein GldE rbh
SCNpilot_expt_1000_bf_scaffold_522_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28011..28442)
DNA (432bp) protein (144aa)
Single-stranded DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT5_NIAKG
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 46 in total

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