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SCNpilot_expt_1000_bf_scaffold_2233

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2233_1
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..551
DNA (549bp) protein (183aa)
PKD domain containing protein id=5023998 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
psrP1; cell wall surface anchor family protein
Tax=GWA2_Bacteroidetes_32_17_curated
SCNpilot_expt_1000_bf_scaffold_2233_2
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

554..1942
DNA (1389bp) protein (463aa)
Peptidase domain protein id=4368784 bin=GWF2_Bacteroidetes_35_48 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_expt_1000_bf_scaffold_2233_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2126..2494
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR54_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98968.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_2233_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2594..4735
DNA (2142bp) protein (714aa)
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR53_NIAKG
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:AEV98967.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor G
SCNpilot_expt_1000_bf_scaffold_2233_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4799..5488)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAU4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57573.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_2233_6
unknown

Not on your lists

5788..5910
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2233_7
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5895..6740
DNA (846bp) protein (282aa)
RteC protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G211_9SPHI
RteC protein {ECO:0000313|EMBL:EEI90701.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
Tetracycline regulation of excision, RteC
SCNpilot_expt_1000_bf_scaffold_2233_8
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6996..7322
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q5_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52165.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_2233_9
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7335..7643
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F0S6Q4_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAE64111.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
SCNpilot_expt_1000_bf_scaffold_2233_10
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7729..7956
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000376221D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGO08673.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
SCNpilot_expt_1000_bf_scaffold_2233_11
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8130..9209
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q3_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52163.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_2233_12
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9216..9425
DNA (210bp) protein (70aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0J9_9FLAO
DNA topoisomerase I {ECO:0000313|EMBL:KFF20000.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
SCNpilot_expt_1000_bf_scaffold_2233_13
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9422..11305
DNA (1884bp) protein (628aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase III n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q2_PEDSD
DNA topoisomerase III {ECO:0000313|EMBL:GAE64113.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
SCNpilot_expt_1000_bf_scaffold_2233_14
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11295..11609
DNA (315bp) protein (105aa)
Putative phage tail component domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0K0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64114.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
KilA-N, DNA-binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2233_15
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11579..12175
DNA (597bp) protein (199aa)
KilA-N, DNA-binding domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q1_PEDSD
KilA-N, DNA-binding domain-containing protein
KilA-N, DNA-binding domain protein {ECO:0000313|EMBL:ADY52161.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_2233_16
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12323..12760
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F0S648_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:GAE64115.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2233_17
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13025..17482
DNA (4458bp) protein (1486aa)
Putative phage prohead protease, HK97 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0L2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64116.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
N-6 DNA methylase
SCNpilot_expt_1000_bf_scaffold_2233_18
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17433..18176
DNA (744bp) protein (248aa)
Helicase C-terminal domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT64_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAE64116.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
N-6 DNA methylase
SCNpilot_expt_1000_bf_scaffold_2233_19
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18186..19007)
DNA (822bp) protein (274aa)
RteC protein n=2 Tax=Bacteroidetes RepID=D7VT63_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAE64117.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Tetracycline regulation of excision, RteC
SCNpilot_expt_1000_bf_scaffold_2233_20
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19137..19631)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Flavobacteriaceae RepID=D5B9M1_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF54334.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_expt_1000_bf_scaffold_2233_21
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19725..20411)
DNA (687bp) protein (229aa)
thiol:disulfide interchange protein n=1 Tax=Nafulsella turpanensis RepID=UPI000346C35E
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KGO08680.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
thiol:disulfide interchange protein
SCNpilot_expt_1000_bf_scaffold_2233_22
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20408..20764)
DNA (357bp) protein (119aa)
Copper chaperone n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z803_BELBD
Uncharacterized protein {ECO:0000313|EMBL:KGO08681.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
copper chaperone
SCNpilot_expt_1000_bf_scaffold_2233_23
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20808..23204)
DNA (2397bp) protein (799aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z802_BELBD
Copper-transporting ATPase {ECO:0000313|EMBL:KGO08683.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
copper/silver-translocating P-type ATPase
SCNpilot_expt_1000_bf_scaffold_2233_24
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23396..24598)
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 n=1 Tax=mine drainage metagenome RepID=E6QMN0_9ZZZZ
MFS transporter {ECO:0000313|EMBL:KGO08682.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
major facilitator transporter
SCNpilot_expt_1000_bf_scaffold_2233_25
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24688..24960)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0Z9_GRAFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL66294.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
SCNpilot_expt_1000_bf_scaffold_2233_26
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25241..26272)
DNA (1032bp) protein (344aa)
Arsenical-resistance protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0E4_9FLAO rbh
Arsenical-resistance protein {ECO:0000313|EMBL:EFK33943.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
SCNpilot_expt_1000_bf_scaffold_2233_27
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26280..26657)
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Y4_9FLAO
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
glycine cleavage system protein H; K02437 glycine cleavage system H protein
SCNpilot_expt_1000_bf_scaffold_2233_28
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26675..27448)
DNA (774bp) protein (258aa)
Ser/Thr phosphatase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0E6_9FLAO
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KGO08724.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
metallophosphoesterase
SCNpilot_expt_1000_bf_scaffold_2233_29
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27493..27957)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G223_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI90713.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2233_30
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28075..28404)
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9A1_PEDSD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADY52451.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Displaying items 1-30 of 36 in total

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