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SCNpilot_expt_1000_bf_scaffold_1273

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1273_1
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(277..1200)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G2C3_ECHVK rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ30157.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1273_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1197..1997)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZV7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK33887.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1273_3
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2632..5292
DNA (2661bp) protein (887aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI000304BACF
Uncharacterized protein {ECO:0000313|EMBL:EJS45033.1}; TaxID=1053171 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG1X1-2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1273_4
unknown

Not on your lists

comp(5359..5592)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1273_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5610..6353)
DNA (744bp) protein (248aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
TatD-related deoxyribonuclease n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DY4_DECAR
TatD-related deoxyribonuclease {ECO:0000313|EMBL:AAZ46947.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1273_6
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6359..7708)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HJ34_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99334.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1273_7
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7705..8670)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N7F5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAT06948.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1273_8
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8670..10631)
DNA (1962bp) protein (654aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F5B63F
NTPase KAP {ECO:0000313|EMBL:KFI26337.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
kap P-loop domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1273_9
Yersinia similis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10773..11243)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FGP5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHK22019.1}; TaxID=367190 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia similis.;"
SCNpilot_expt_1000_bf_scaffold_1273_10
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11499..13478)
DNA (1980bp) protein (660aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003762764
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO85914.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
type IV secretory pathway VirD4 components-like protein
SCNpilot_expt_1000_bf_scaffold_1273_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13503..14903)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003650480
Uncharacterized protein {ECO:0000313|EMBL:KIC89902.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Relaxase/mobilization nuclease family protein
SCNpilot_expt_1000_bf_scaffold_1273_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14888..15280)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037235E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05331.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_1273_13
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15544..16389)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037C2E19
DNA primase {ECO:0000313|EMBL:KFC58806.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
DNA primase
SCNpilot_expt_1000_bf_scaffold_1273_14
unknown

Not on your lists

16579..16998
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1273_15
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17035..17289)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G483_ECHVK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA80113.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
Displaying 15 items

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