name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_293_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(246..1412)
|
Putative chromate transport protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B6M4_PSEAC
Chromate transporter {ECO:0000313|EMBL:KFL25347.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transporter
|
|
SCNpilot_expt_1000_bf_scaffold_293_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1508..2080
|
TetR family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EM48_9RHOB
HTH-type transcriptional regulator BetI {ECO:0000313|EMBL:KJL24832.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_293_3
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
2077..3249
|
Monooxygenase, FAD-binding n=2 Tax=Saccharopolyspora erythraea RepID=A4FAH1_SACEN
rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KHD96552.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
FAD-binding monooxygenase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_293_4
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3317..4168)
|
Ureidoglycolate lyase n=1 Tax=Halomonas sp. HAL1 RepID=G4F4Q8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKB79478.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
2,4-diketo-3-deoxy-L-fuconate hydrolase
|
|
SCNpilot_expt_1000_bf_scaffold_293_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4248..4679)
|
RbsD/FucU transport protein family; K02431 L-fucose mutarotase [EC:5.1.3.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003660126
Fucose operon fucU protein {ECO:0000313|EMBL:CDP51012.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4686..5429)
|
Transcriptional regulator, GntR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCW6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB11806.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
GntR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_293_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5498..7048
|
galactarate dehydratase; K01685 altronate hydrolase [EC:4.2.1.7]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A941A
Galactarate dehydratase {ECO:0000313|EMBL:KKB76950.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7051..8088
|
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0CFX8_RHILT
Dehydratase {ECO:0000313|EMBL:KGM31988.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aldo/keto reductase
|
|
SCNpilot_expt_1000_bf_scaffold_293_9
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8085..8360
|
Acylphosphatase {ECO:0000313|EMBL:CCG07899.1}; EC=3.6.1.7 {ECO:0000313|EMBL:CCG07899.1};; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
Acylphosphatase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SSM0_RHOPH
|
|
SCNpilot_expt_1000_bf_scaffold_293_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8658..9098
|
Nucleoside diphosphate kinase regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QIU4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB76853.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
nucleoside diphosphate kinase regulator; K06140 regulator of nucleoside diphosphate kinase
|
|
SCNpilot_expt_1000_bf_scaffold_293_11
unknown
|
Not on your lists |
9250..9465
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_293_12
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9568..11040
|
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AJY46191.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AJY46191.1};; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
succinic semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
succinate-semialdehyde dehdyrogenase n=1 Tax=Rhizobium meliloti RepID=UPI00036D9A88
|
|
SCNpilot_expt_1000_bf_scaffold_293_13
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(11142..11531)
|
Nuclear protein SET n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L5G5_SAPGL
nuclear protein SET; K07117
Nuclear protein SET {ECO:0000313|EMBL:EKN67589.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_14
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11593..12009)
|
Transcriptional regulator, MerR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGB2_METPP
copG; MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABM94601.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12095..14719
|
Lead, cadmium, zinc and mercury transporting ATPas e {ECO:0000313|EMBL:CDP50995.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CDP50995.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CDP50995.1};; EC=3.6.3.5 {ECO:0000313|EMBL:CDP50995.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Potassium-transporting ATPase B chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4V0_9RHIZ
heavy metal efflux P-type ATPase
|
|
SCNpilot_expt_1000_bf_scaffold_293_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14709..15137)
|
Uncharacterized protein {ECO:0000313|EMBL:KKB11828.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15291..16463
|
L-lactate dehydrogenase {ECO:0000313|EMBL:CDP50997.1}; EC=1.1.2.3 {ECO:0000313|EMBL:CDP50997.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
FMN-dependent alpha-hydroxy acid dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2V189_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_293_18
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16470..16784)
|
UPI0003CEAD9B related cluster n=1 Tax=unknown RepID=UPI0003CEAD9B
XRE family transcriptional regulator {ECO:0000313|EMBL:ESY76151.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
helix-turn-helix domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_19
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16781..17104)
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDM6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV14446.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17143..17958)
|
Putative transmembrane anti-sigma factor n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M4F0_9RHIZ
Transmembrane regulator protein PrtR {ECO:0000313|EMBL:CDP50998.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative transmembrane anti-sigma factor
|
|
SCNpilot_expt_1000_bf_scaffold_293_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17955..18464)
|
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7E6_9RHIZ
RNA polymerase sigma factor {ECO:0000313|EMBL:KKB85670.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_expt_1000_bf_scaffold_293_22
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18500..18898)
|
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PIJ4_9RHIZ
Lipoprotein {ECO:0000313|EMBL:KKB85671.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_23
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19057..20142
|
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF83_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP53073.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
TRAP transporter solute receptor
|
|
SCNpilot_expt_1000_bf_scaffold_293_24
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20203..21594)
|
C4 dicarboxylate transporter permease n=1 Tax=Nitratireductor indicus C115 RepID=K2N4Y3_9RHIZ
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KKB85689.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
TRAP dicarboxylate transporter subunit DctM
|
|
SCNpilot_expt_1000_bf_scaffold_293_25
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21591..22079)
|
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Nitratireductor indicus C115 RepID=K2PN02_9RHIZ
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KKB12437.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
tripartite ATP-independent periplasmic transporter DctQ
|
|
SCNpilot_expt_1000_bf_scaffold_293_26
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22290..23240
|
Fructokinase {ECO:0000313|EMBL:CDP51001.1}; EC=2.7.1.4 {ECO:0000313|EMBL:CDP51001.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
fructokinase; K00847 fructokinase [EC:2.7.1.4]
Fructokinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCW1_PELHB
|
|
SCNpilot_expt_1000_bf_scaffold_293_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23408..24292
|
gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035F9B0A
rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB07540.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_28
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24354..24995
|
Keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:KFL26141.1}; EC=4.1.2.14 {ECO:0000313|EMBL:KFL26141.1};; EC=4.1.3.16 {ECO:0000313|EMBL:KFL26141.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
4-hydroxy-2-ketovalerate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCV3_PELHB
|
|
SCNpilot_expt_1000_bf_scaffold_293_29
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24995..25366
|
DNA-binding domain of ModE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCV4_PELHB
ModE family transcriptional regulator {ECO:0000313|EMBL:KKB79463.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
DNA-binding domain of ModE; K02019 molybdate transport system regulatory protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_30
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25434..26171
|
Molybdate ABC transporter substrate-binding protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8H6D1_RHOCA
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKC34259.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
modA1; molybdenum ABC transporter periplasmic molybdenum-binding protein ModA; K02020 molybdate transport system substrate-binding protein
|