name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1296_1
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(137..625)
|
UPI0003D1B364 related cluster n=1 Tax=unknown RepID=UPI0003D1B364
Contig2, whole genome shotgun sequence {ECO:0000313|EMBL:ETA49703.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1296_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2314..3288)
|
Mg2 transporter protein CorA family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FE39_9RHIZ
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
corA1; magnesium/cobalt transporter CorA
|
|
SCNpilot_expt_1000_bf_scaffold_1296_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3473..4024)
|
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0A9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31900.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
|
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SCNpilot_expt_1000_bf_scaffold_1296_4
unknown
|
Not on your lists |
comp(4043..4375)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1296_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4378..5271)
|
Transcriptional regulator, LysR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU7_PELHB
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDP50149.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1296_6
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5274..6224)
|
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Thioredoxin reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU6_PELHB
rbh
|
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SCNpilot_expt_1000_bf_scaffold_1296_7
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6578..7054)
|
Transcription elongation factor GreA n=2 Tax=Pseudovibrio RepID=G8PGB3_PSEUV
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transcription elongation factor GreA domain-containing protein; K03624 transcription elongation factor GreA
|
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SCNpilot_expt_1000_bf_scaffold_1296_8
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7216..7821)
|
Putative transcriptional Regulator, TetR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7L0_9RHOB
transcriptional regulator, TetR family
Putative transcriptional Regulator, TetR family {ECO:0000313|EMBL:EEA92706.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. JE062.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1296_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8257..8469)
|
Cold shock protein CspA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU3_PELHB
Cold-shock protein {ECO:0000313|EMBL:KKB13441.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
cold shock protein CspA; K03704 cold shock protein (beta-ribbon, CspA family)
|
|
SCNpilot_expt_1000_bf_scaffold_1296_10
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8859..9902
|
threonine aldolase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00037169CC
Threonine aldolase {ECO:0000313|EMBL:KFL26696.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1296_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9886..10587)
|
Metal-dependent hydrolase n=2 Tax=environmental samples RepID=E7C2I6_9RHIZ
Endonuclease {ECO:0000313|EMBL:KFL27376.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SN-glycerol-3-phosphate transport ATP-binding protein UgpC; K06896
|
|
SCNpilot_expt_1000_bf_scaffold_1296_12
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10705..11067)
|
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B2FE01
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO68163.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1296_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11068..11859)
|
Phytanoyl-CoA dioxygenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXJ8_SORCE
rbh
phytanoyl-CoA dioxygenase
rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:AGP36625.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1296_14
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12135..13553
|
Methyltransferase type 12 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU0_PELHB
Methyltransferase type 12 {ECO:0000313|EMBL:KFC66988.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
methyltransferase type 12
|
|
SCNpilot_expt_1000_bf_scaffold_1296_15
unknown
|
Not on your lists |
comp(13508..13636)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1296_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13749..14126
|
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000375C819
Uncharacterized protein {ECO:0000313|EMBL:KKB84698.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1296_17
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14223..15215)
|
Putative reductase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L2D4_9SPHN
Putative reductase {ECO:0000313|EMBL:EIZ78429.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
putative reductase
|
|
SCNpilot_expt_1000_bf_scaffold_1296_18
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15217..18537)
|
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Carbamoyl-phosphate synthase large chain; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase large chain n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGT7_PELHB
|
|
SCNpilot_expt_1000_bf_scaffold_1296_19
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19485..19766
|
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCB0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB13689.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1296_20
unknown
|
Not on your lists |
19803..20015
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1296_21
unknown
|
Not on your lists |
20028..20618
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1296_22
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20667..21281
|
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EGP9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV03405.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1296_23
unknown
|
Not on your lists |
comp(21327..21854)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1296_24
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21859..22191)
|
ATP-dependent Clp protease ClpS n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B84B6
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
clpS; ATP-dependent Clp protease adaptor
|
|
SCNpilot_expt_1000_bf_scaffold_1296_25
unknown
|
Not on your lists |
comp(22214..22285)
|
This feature has no annotations |