name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1140_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..535)
|
Peptide chain release factor 3 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RF3_THIDA
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000255|HAMAP-Rule:MF_00072}; Short=RF-3 {ECO:0000255|HAMAP-Rule:MF_00072};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1140_2
unknown
|
Not on your lists |
comp(988..1182)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1140_3
unknown
|
Not on your lists |
comp(1197..2033)
|
id=12497435 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
|
|
SCNpilot_expt_1000_bf_scaffold_1140_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2685..3914)
|
aspartate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00037C4E28
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3975..5273)
|
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
rbh
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01010}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
23S rRNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003787200
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1140_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5270..5947)
|
Putative uncharacterized protein id=1321121 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein; K07501 hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6074..7363)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003648299
signal transduction protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7469..8911
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037537DD
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8901..10538)
|
glucose-6-phosphate isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI000371D39C
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10634..11119
|
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
peptidylprolyl isomerase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003687DCF
FKBP-type peptidyl-prolyl cis-trans isomerase protein
|
|
SCNpilot_expt_1000_bf_scaffold_1140_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11170..11679)
|
sterol-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036800B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96929.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1140_12
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(11795..12211)
|
hypothetical protein; K07112 id=12497410 bin=THIO_MID species=Flavobacterium rivuli genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=THIO_MID organism_group=Betaproteobacteria
Transporter {ECO:0000313|EMBL:KGO81590.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein; K07112
|
|
SCNpilot_expt_1000_bf_scaffold_1140_13
Deinococcus proteolyticus, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
|
Not on your lists |
comp(12218..12790)
|
hypothetical protein; K07112 id=12497409 bin=THIO_MID species=Deinococcus aquatilis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K07112
Uncharacterized protein {ECO:0000313|EMBL:ADY25276.1}; TaxID=693977 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 /; NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1140_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12848..13531)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003775349
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96930.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1140_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13528..14475)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375A3B9
ABC-type transport system periplasmic component
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14472..14840)
|
Putative uncharacterized protein id=1351335 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14906..15700)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003769227
ABC-type transport system permease
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15786..16319
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003645DD9
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16316..17260
|
TPR repeat-containing Zn-dependent protease id=12497403 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TPR repeat-containing Zn-dependent protease
Putative Zn-dependent protease containing TPR repeats {ECO:0000313|EMBL:AAZ96935.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1140_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17257..19473
|
adenylyl cyclase class-3/4/guanylyl cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Adenylyl cyclase class-3/4/guanylyl cyclase id=1351339 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19475..20242
|
cyclic-AMP phosphodiesterase id=12493389 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cyclic-AMP phosphodiesterase
cAMP phosphodiesterase class-II {ECO:0000313|EMBL:AAZ96937.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1140_22
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20320..20592
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE49_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO36830.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1140_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20605..21630)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003759E4A
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21736..23058)
|
cytochrome C n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037EF08B
rbh
Flavocytochrome c sulfide dehydrogenase
rbh
Tax=RBG_16_Gamma2_65_34_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_25
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23055..23375)
|
Cytochrome c, class I n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0J2_9GAMM
Cytochrome c, class I {ECO:0000313|EMBL:EHQ51329.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
cytochrome c class I
|
|
SCNpilot_expt_1000_bf_scaffold_1140_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23416..23925)
|
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FE195
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24215..24943)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037553DD
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25009..27558)
|
Multi-sensor Hybrid Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK52_THIDA
Multi-sensor Hybrid Histidine Kinase {ECO:0000313|EMBL:AAZ96940.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1140_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27569..28636)
|
transport system ATPase; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
cell division protein FtsE n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D3891
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1140_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28629..29636)
|
FeT family ferric iron ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000382426C
iron transport system permease; K02011 iron(III) transport system permease protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|