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SCNpilot_expt_1000_bf_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 527 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_204_1
unknown

Not on your lists

1..78
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_204_2
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75..1751
DNA (1677bp) protein (559aa)
xylan beta-1,4-xylosidase; K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37]
Glycosyl hydrolase, family 43 n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L2E2_9ACTO rbh
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:KDN79016.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
SCNpilot_expt_1000_bf_scaffold_204_3
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1748..2734
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DCEDC8 rbh
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62174.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_204_4
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2712..4085)
DNA (1374bp) protein (458aa)
Polygalacturonase {ECO:0000313|EMBL:KFI92304.1}; EC=3.2.1.15 {ECO:0000313|EMBL:KFI92304.1};; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
polygalacturonase (EC:3.2.1.15)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000370E9E2 rbh
SCNpilot_expt_1000_bf_scaffold_204_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5193..6155
DNA (963bp) protein (321aa)
sugar ABC transporter permease n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B49D80 rbh
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN36025.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type polysaccharide transport system, permease component rbh
SCNpilot_expt_1000_bf_scaffold_204_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6169..7122
DNA (954bp) protein (318aa)
sugar ABC transporter permease n=1 Tax=Blautia producta RepID=UPI00037ED920 rbh
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN36024.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
binding-protein-dependent transport system inner membrane protein rbh
SCNpilot_expt_1000_bf_scaffold_204_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7240..8832
DNA (1593bp) protein (531aa)
ABC transporter substrate-binding protein n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B55206
Uncharacterized protein {ECO:0000313|EMBL:EGN36023.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_204_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8916..9635
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B523A4
Uncharacterized protein {ECO:0000313|EMBL:EET59153.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_204_9
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9690..12440
DNA (2751bp) protein (917aa)
Glycoside hydrolase family 35 n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3R9_CELFA rbh
glycoside hydrolase family 35 rbh
Glycoside hydrolase family 35 {ECO:0000313|EMBL:AEE47735.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_expt_1000_bf_scaffold_204_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12451..13683
DNA (1233bp) protein (411aa)
ROK family protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3R8_CELFA rbh
ROK family protein rbh
ROK family protein {ECO:0000313|EMBL:AEE47734.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_expt_1000_bf_scaffold_204_11
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13497..16769)
DNA (3273bp) protein (1091aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B31BA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL20299.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_204_12
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16938..17828)
DNA (891bp) protein (297aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BG84_SANKS rbh
AraC family transcriptional regulator rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:ACZ23601.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_expt_1000_bf_scaffold_204_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17860..20214)
DNA (2355bp) protein (785aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00035DACF4 rbh
beta-galactosidase rbh
Beta-galactosidase {ECO:0000313|EMBL:AGL20007.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_expt_1000_bf_scaffold_204_14
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20226..23159)
DNA (2934bp) protein (978aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003805BC0 rbh
Beta-galactosidase {ECO:0000313|EMBL:EWS82320.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
putative glycoside hydrolase rbh
SCNpilot_expt_1000_bf_scaffold_204_15
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23289..23657)
DNA (369bp) protein (123aa)
DoxX family protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGI3_CELFN
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ADG73166.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_expt_1000_bf_scaffold_204_16
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23773..24183
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E686C
Transcriptional regulator {ECO:0000313|EMBL:KIF71496.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
transcriptional regulator, HxlR family
SCNpilot_expt_1000_bf_scaffold_204_17
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24259..25686)
DNA (1428bp) protein (476aa)
Putative alpha-galactosidase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WDN8_KINRD rbh
alpha-galactosidase rbh
Putative alpha-galactosidase {ECO:0000313|EMBL:ABS04927.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_expt_1000_bf_scaffold_204_18
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26199..28400
DNA (2202bp) protein (734aa)
beta-galactosidase; K12308 beta-galactosidase [EC:3.2.1.23]
beta-galactosidase n=1 Tax=Agromyces subbeticus RepID=UPI0003B49513 rbh
Putative beta-galactosidase {ECO:0000313|EMBL:CBG67925.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
SCNpilot_expt_1000_bf_scaffold_204_19
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28433..30415
DNA (1983bp) protein (661aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C531_BEUC1 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJW80718.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
hypothetical protein; K09955 hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_204_20
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30437..32386
DNA (1950bp) protein (650aa)
Uncharacterized conserved protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BJJ5_SANKS rbh
hypothetical protein; K09955 hypothetical protein rbh
Uncharacterized conserved protein {ECO:0000313|EMBL:ACZ20251.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_expt_1000_bf_scaffold_204_21
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32428..34554
DNA (2127bp) protein (709aa)
alpha-glucosidase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177] rbh
Family 31 glycosyl hydrolase, alpha-glucosidase n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BJK0_SANKS rbh
Family 31 glycosyl hydrolase, alpha-glucosidase {ECO:0000313|EMBL:ACZ20256.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_expt_1000_bf_scaffold_204_22
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34583..35047)
DNA (465bp) protein (155aa)
Putative transcriptional regulator, MerR family n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W9B2_KINRD
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:AIY01803.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
MerR family transcriptional regulator; K13639 MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
SCNpilot_expt_1000_bf_scaffold_204_23
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35111..35782
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI0003730A62
Uncharacterized protein {ECO:0000313|EMBL:EYT65739.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hypothetical protein; K07104
SCNpilot_expt_1000_bf_scaffold_204_24
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36705..37985
DNA (1281bp) protein (427aa)
ABC transporter, extracellular substrate binding protein, probably fructooligosaccharide porter n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IK97_BIFAP
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:KFI81876.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
ABC transporter, extracellular substrate binding protein, probably fructooligosaccharide porter
SCNpilot_expt_1000_bf_scaffold_204_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38049..39014
DNA (966bp) protein (322aa)
Sugar permease of ABC transporter system n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZQ2_BIFAA rbh
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
Sugar permease of ABC transporter system {ECO:0000313|EMBL:BAF38935.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
SCNpilot_expt_1000_bf_scaffold_204_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39011..39910
DNA (900bp) protein (300aa)
Sugar permease of ABC transporter system n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZQ3_BIFAA rbh
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30343.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
SCNpilot_expt_1000_bf_scaffold_204_27
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

39924..41078
DNA (1155bp) protein (385aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C0M4_9EURY
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:ELZ15464.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
glycosyl hydrolase BNR repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_204_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41075..42175
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K783_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGN41694.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_204_29
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42172..44460
DNA (2289bp) protein (763aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55); K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55] rbh
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:ACQ79777.1}; EC=3.2.1.55 {ECO:0000313|EMBL:ACQ79777.1};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Alpha-N-arabinofuranosidase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C378_BEUC1 rbh
SCNpilot_expt_1000_bf_scaffold_204_30
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44533..45627
DNA (1095bp) protein (365aa)
Transcriptional regulator, LacI family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A366_CELGA
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEI13059.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Displaying items 1-30 of 527 in total

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