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SCNpilot_expt_1000_bf_scaffold_2719

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2719_1
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..324
DNA (324bp) protein (108aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
UPI0003CE0687 related cluster n=1 Tax=unknown RepID=UPI0003CE0687
proton-translocating NADH-quinone oxidoreductase, chain N
SCNpilot_expt_1000_bf_scaffold_2719_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

324..1151
DNA (828bp) protein (276aa)
Biotin--(Acetyl-CoA-carboxylase) synthetase {ECO:0000313|EMBL:CCV14579.1}; EC=6.3.4.15 {ECO:0000313|EMBL:CCV14579.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Biotin--(Acetyl-CoA-carboxylase) synthetase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FLJ4_9RHIZ rbh
birA, biotin-(acetyl-CoA-carboxylase) ligase rbh
SCNpilot_expt_1000_bf_scaffold_2719_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1188..2903
DNA (1716bp) protein (572aa)
Beta-lactamase domain protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUM8_9RHIZ
Beta-lactamase domain protein {ECO:0000313|EMBL:CCV07628.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
putative hydrolase of the metallo-beta-lactamase superfamily
SCNpilot_expt_1000_bf_scaffold_2719_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3014..3418
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBE8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV14577.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
methylmalonyl-CoA epimerase
SCNpilot_expt_1000_bf_scaffold_2719_5
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3415..3684
DNA (270bp) protein (90aa)
UPI0003CEAD47 related cluster n=1 Tax=unknown RepID=UPI0003CEAD47
Membrane protein {ECO:0000313|EMBL:ESW86259.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2719_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4126..5454
DNA (1329bp) protein (443aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01570}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
PREDICTED: probable proline--tRNA ligase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11198 rbh
SCNpilot_expt_1000_bf_scaffold_2719_7
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5451..6764
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FLJ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV14574.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein; K09808 lipoprotein-releasing system permease protein
SCNpilot_expt_1000_bf_scaffold_2719_8
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6761..7444
DNA (684bp) protein (228aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
UPI0003CE046E related cluster n=1 Tax=unknown RepID=UPI0003CE046E
ABC transporter
SCNpilot_expt_1000_bf_scaffold_2719_9
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7776..8510)
DNA (735bp) protein (245aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] rbh
UPI0003CDEB23 related cluster n=1 Tax=unknown RepID=UPI0003CDEB23 rbh
SCNpilot_expt_1000_bf_scaffold_2719_10
unknown

Not on your lists

9073..10521
DNA (1449bp) protein (483aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2719_11
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10599..12017
DNA (1419bp) protein (473aa)
UPI0003CF527D related cluster n=1 Tax=unknown RepID=UPI0003CF527D rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
magnesium transporter; K06213 magnesium transporter rbh
SCNpilot_expt_1000_bf_scaffold_2719_12
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12149..12580
DNA (432bp) protein (144aa)
MerR family transcriptional regulator n=2 Tax=Mesorhizobium RepID=V7F5S7_9RHIZ
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCV07612.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2719_13
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12587..13060)
DNA (474bp) protein (158aa)
UPI0003CE2BE8 related cluster n=1 Tax=unknown RepID=UPI0003CE2BE8
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ESY76061.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2719_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13057..14055)
DNA (999bp) protein (333aa)
Mlr1315 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KU6_RHILO
hypothetical protein
Mlr1315 protein {ECO:0000313|EMBL:BAB48718.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_2719_15
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14499..15485
DNA (987bp) protein (329aa)
UPI0003CE4835 related cluster n=1 Tax=unknown RepID=UPI0003CE4835 rbh
MFS transporter {ECO:0000313|EMBL:ESZ33381.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
major facilitator superfamily protein rbh
SCNpilot_expt_1000_bf_scaffold_2719_16
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15495..16670)
DNA (1176bp) protein (392aa)
UPI0003CF4647 related cluster n=1 Tax=unknown RepID=UPI0003CF4647
Dioxygenase {ECO:0000313|EMBL:ESW86218.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
dioxygenase
SCNpilot_expt_1000_bf_scaffold_2719_17
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16827..17345
DNA (519bp) protein (173aa)
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosylcobinamide kinase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GQ62_9RHIZ
Adenosylcobinamide kinase {ECO:0000313|EMBL:ESW80928.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
SCNpilot_expt_1000_bf_scaffold_2719_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17347..17976
DNA (630bp) protein (210aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:CDX12780.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CDX12780.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cobinamide adenolsyltransferase n=1 Tax=Rhizobium loti RepID=UPI00036D30EA
cob(I)alamin adenosyltransferase
SCNpilot_expt_1000_bf_scaffold_2719_19
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17985..18911)
DNA (927bp) protein (309aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
UPI0003CDDD2A related cluster n=1 Tax=unknown RepID=UPI0003CDDD2A
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_expt_1000_bf_scaffold_2719_20
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18949..19983
DNA (1035bp) protein (345aa)
UPI0003CE957D related cluster n=1 Tax=unknown RepID=UPI0003CE957D
Aspartate aminotransferase {ECO:0000313|EMBL:ESW86212.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
L-threonine-O-3-phosphate decarboxylase; K02225 cobalamin biosynthetic protein CobC
SCNpilot_expt_1000_bf_scaffold_2719_21
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19980..20501
DNA (522bp) protein (174aa)
UPI0003CE2CAE related cluster n=1 Tax=unknown RepID=UPI0003CE2CAE
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ESX62079.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2719_22
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20510..21313)
DNA (804bp) protein (268aa)
hypothetical protein; K01470 creatinine amidohydrolase [EC:3.5.2.10] rbh
creatininase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E35110 rbh
Creatininase {ECO:0000313|EMBL:ESX74078.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_expt_1000_bf_scaffold_2719_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21387..23846)
DNA (2460bp) protein (820aa)
sarcosine dehydrogenase; K00314 sarcosine dehydrogenase [EC:1.5.8.3]
UPI0003CE6ACC related cluster n=1 Tax=unknown RepID=UPI0003CE6ACC
Sarcosine dehydrogenase {ECO:0000313|EMBL:CDX29539.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_2719_24
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23843..25000)
DNA (1158bp) protein (386aa)
PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B43F
Aspartate aminotransferase {ECO:0000313|EMBL:ESZ25249.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
class I and II aminotransferase
SCNpilot_expt_1000_bf_scaffold_2719_25
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25004..27457)
DNA (2454bp) protein (818aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F6Q3_9RHIZ rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDX44261.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
glycine cleavage system T protein (aminomethyltransferase) rbh
SCNpilot_expt_1000_bf_scaffold_2719_26
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27478..28104)
DNA (627bp) protein (209aa)
Transcriptional regulator, XRE family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU82_9RHIZ
Cupin {ECO:0000313|EMBL:CDX12724.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2719_27
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28213..28800)
DNA (588bp) protein (196aa)
Sarcosine oxidase subunit gamma n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGC1_9RHIZ
Sarcosine oxidase gamma subunit {ECO:0000313|EMBL:CDX12712.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
sarcosine oxidase, gamma subunit family, heterotetrameric form
SCNpilot_expt_1000_bf_scaffold_2719_28
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28793..31789)
DNA (2997bp) protein (999aa)
sarcosine oxidase subunit alpha; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Sarcosine oxidase alpha subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCM7_9RHIZ
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:EHH10349.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_2719_29
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31786..32082)
DNA (297bp) protein (99aa)
Sarcosine oxidase subunit delta {ECO:0000313|EMBL:CCV14534.1}; EC=1.5.3.1 {ECO:0000313|EMBL:CCV14534.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Sarcosine oxidase subunit delta n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FLI5_9RHIZ
sarcosine oxidase, delta subunit family, heterotetrameric form
SCNpilot_expt_1000_bf_scaffold_2719_30
unknown

Not on your lists

32121..32252
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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