name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1423_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..605
|
cytosine deaminase or related metal-dependent hydrolase (EC:3.5.4.-)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E2BC86
Cytosine deaminase {ECO:0000313|EMBL:KGE65078.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_2
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
643..963
|
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RYJ4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP44685.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1290..2558
|
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000370CD32
rbh
livJ; putative branched-chain amino acid ABC transporter binding component; K01999 branched-chain amino acid transport system substrate-binding protein
rbh
Putative branched-chain amino acid ABC transporter binding component {ECO:0000313|EMBL:CAK02825.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_4
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2621..3499
|
Branched-chain amino acid ABC transporter permease n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I1V2_9RHIZ
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EPE93778.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
livM; putative branched-chain amino acid ABC transporter permease component; K01997 branched-chain amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1423_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
3496..4446
|
Branched-chain amino acid transport system permease protein LivM id=4346124 bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rbh
livH; putative branched chain amino acid ABC transporter permease component; K01998 branched-chain amino acid transport system permease protein
rbh
Tax=GWC2_Rokubacteria_70_16_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1423_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4443..5168
|
Putative branched-chain amino acid ABC transporter ATP-binding component id=4166559 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livG; putative branched-chain amino acid ABC transporter ATP-binding component; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1423_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
5149..5880
|
Branched-chain amino acid transport ATP-binding protein LivF id=3109909 bin=GWF2_Methylomirabilis_70_14 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livF; putative high-affinity branched-chain amino acid transport ATP-binding protein LivF; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1423_8
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5937..6869)
|
Dihydrodipicolinate synthetase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0D6_MESOW
rbh
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:AEH84774.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6869..8545)
|
PREDICTED: putative dihydroxy-acid dehydratase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1566F
rbh
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:AHK46079.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_10
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8603..9382)
|
PREDICTED: 17-beta-hydroxysteroid dehydrogenase 14-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18C66
rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EIM74742.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1423_11
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9379..10263)
|
Aldose 1-epimerase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9A1_MESCW
rbh
aldose 1-epimerase
rbh
Aldose 1-epimerase {ECO:0000313|EMBL:ADV09476.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10272..11222)
|
Inner-membrane translocator n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0D9_MESOW
rbh
inner-membrane translocator; K10538 L-arabinose transport system permease protein
rbh
Inner-membrane translocator {ECO:0000313|EMBL:AEH84777.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11234..12745)
|
Arabinose import ATP-binding protein AraG {ECO:0000256|HAMAP-Rule:MF_01721}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01721};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003D03990 related cluster n=1 Tax=unknown RepID=UPI0003D03990
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1423_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12817..13809)
|
Arabinose ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G710_9RHIZ
rbh
L-arabinose-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR002816}; Short=ABP {ECO:0000256|PIRNR:PIRNR002816};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
periplasmic binding protein/LacI transcriptional regulator; K10537 L-arabinose transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1423_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14021..14764
|
UPI0003CF95AA related cluster n=1 Tax=unknown RepID=UPI0003CF95AA
rbh
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDX40845.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
GntR family transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1423_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14787..15911
|
Galactonate dehydratase {ECO:0000313|EMBL:CDX14916.1}; EC=4.2.1.6 {ECO:0000313|EMBL:CDX14916.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
mandelate racemase/muconate lactonizing protein; K01684 galactonate dehydratase [EC:4.2.1.6]
PREDICTED: uncharacterized protein LOC102332507 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C187D5
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1423_17
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15934..16776)
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000377E23C
Uncharacterized protein {ECO:0000313|EMBL:CCV06196.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Protein of unknown function (DUF1194)
|
|
SCNpilot_expt_1000_bf_scaffold_1423_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17522..18232
|
Aspartate aminotransferase, PLP-dependent {ECO:0000313|EMBL:CDX18602.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDX18602.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQY5_MESAW
aspartate/tyrosine/aromatic aminotransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1423_19
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18248..19072
|
MazG family protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KR74_MESAW
MazG family protein
MazG family protein {ECO:0000313|EMBL:AGB46504.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_20
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19074..20240)
|
GTPase HflX n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBM4_9RHIZ
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
GTP binding protein-like; K03665 GTP-binding protein HflX
|
|
SCNpilot_expt_1000_bf_scaffold_1423_21
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20466..20711)
|
RNA-binding protein Hfq n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D1CA6
RNA chaperone Hfq; K03666 host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_22
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20857..21750)
|
class IV aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
D-amino acid aminotransferase n=1 Tax=Rhizobium loti RepID=UPI000367E1FD
Aminotransferase class IV family protein {ECO:0000313|EMBL:AID29992.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_23
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22017..22823)
|
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
UPI0003CF54FF related cluster n=1 Tax=unknown RepID=UPI0003CF54FF
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1423_24
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22956..23513)
|
flagellar motor protein MotB n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A4D85
Flagellar motor protein MotB {ECO:0000313|EMBL:EXL04063.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
OmpA/MotB domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1423_25
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23606..24169)
|
Mlr0356 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98N08_RHILO
hypothetical protein
Acetyltransferase {ECO:0000313|EMBL:ETA72977.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_26
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24175..25026)
|
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
rbh
UPI0003CE9F0E related cluster n=1 Tax=unknown RepID=UPI0003CE9F0E
rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25074..25817)
|
Ala-tRNA(Pro) hydrolase n=1 Tax=Rhizobium loti RepID=UPI00037C99C1
Alanyl-tRNA synthetase {ECO:0000313|EMBL:CDX35644.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
alanyl-tRNA synthetase; K07050
|
|
SCNpilot_expt_1000_bf_scaffold_1423_28
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25817..26851)
|
PREDICTED: cysteine synthase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10C83
rbh
Cysteine synthase {ECO:0000313|EMBL:ESZ06540.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1423_29
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27061..27903
|
PREDICTED: carbonyl reductase family member 4-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19427
rbh
Oxidoreductase {ECO:0000313|EMBL:EXL04066.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
|
|
SCNpilot_expt_1000_bf_scaffold_1423_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28060..29064)
|
methylmalonyl-CoA carboxyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035D0DF9
Carboxyl transferase {ECO:0000313|EMBL:EHK55063.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
|