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SCNpilot_expt_1000_bf_scaffold_1606

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1606_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257..1450
DNA (1194bp) protein (398aa)
UPI0003CF169E related cluster n=1 Tax=unknown RepID=UPI0003CF169E rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY65537.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1606_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1527..2078)
DNA (552bp) protein (184aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSS0_9RHIZ
GCN5 family acetyltransferase {ECO:0000313|EMBL:EZQ16712.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
N-acetyltransferase GCN5
SCNpilot_expt_1000_bf_scaffold_1606_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2355..2816
DNA (462bp) protein (154aa)
Protein aau3 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F6E5_9RHIZ
Protein aau3 {ECO:0000313|EMBL:CDX44579.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
BadM/Rrf2 family transcriptional regulator; K13772 Rrf2 family transcriptional regulator, iron-responsive regulator
SCNpilot_expt_1000_bf_scaffold_1606_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2875..3663)
DNA (789bp) protein (263aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hmuV; hemin importer ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Hemin import ATP-binding protein hmuV n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FB13_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1606_5
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3675..4778)
DNA (1104bp) protein (368aa)
Heme ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGN9_9RHIZ
Heme ABC transporter permease {ECO:0000313|EMBL:ESX74183.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ABC-type Fe3+-siderophore transport system, permease component
SCNpilot_expt_1000_bf_scaffold_1606_6
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4792..5685)
DNA (894bp) protein (298aa)
Periplasmic binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCX3_9RHIZ
Periplasmic binding protein {ECO:0000313|EMBL:EHH10445.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1606_7
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5696..6754)
DNA (1059bp) protein (353aa)
Hemin transport protein hmuS n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETX5_9RHIZ
Hemin transport protein hmuS {ECO:0000313|EMBL:CCV07475.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hemin-degrading family protein; K07225 putative hemin transport protein
SCNpilot_expt_1000_bf_scaffold_1606_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6806..7015)
DNA (210bp) protein (70aa)
Hemin uptake protein hemP n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJC0_MESCW
Hemin transporter HemP {ECO:0000313|EMBL:EXL09833.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hemin uptake protein HemP
SCNpilot_expt_1000_bf_scaffold_1606_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7216..9255
DNA (2040bp) protein (680aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036602B8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB10688.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
TonB-dependent heme/hemoglobin receptor family protein; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_expt_1000_bf_scaffold_1606_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9267..9698
DNA (432bp) protein (144aa)
UPI0003D00310 related cluster n=1 Tax=unknown RepID=UPI0003D00310
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESZ25150.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_expt_1000_bf_scaffold_1606_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9711..11039
DNA (1329bp) protein (443aa)
TonB family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST0_9RHIZ rbh
TonB family protein {ECO:0000313|EMBL:EHK56217.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TonB family protein; K03832 periplasmic protein TonB
SCNpilot_expt_1000_bf_scaffold_1606_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11091..11405
DNA (315bp) protein (105aa)
UPI0003D04977 related cluster n=1 Tax=unknown RepID=UPI0003D04977
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EXL09835.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
antibiotic biosynthesis monooxygenase; K07145
SCNpilot_expt_1000_bf_scaffold_1606_13
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11402..11776
DNA (375bp) protein (125aa)
Putative bleomycin resistance protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDM2_9RHIZ
Putative bleomycin resistance protein {ECO:0000313|EMBL:CCV14441.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
bleomycin resistance protein
SCNpilot_expt_1000_bf_scaffold_1606_14
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12609..16220)
DNA (3612bp) protein (1204aa)
UPI0003CEC598 related cluster n=1 Tax=unknown RepID=UPI0003CEC598 rbh
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ESY70913.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
delta-1-pyrroline-5-carboxylate dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_1606_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16334..16813
DNA (480bp) protein (160aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCW3_9RHIZ
transcriptional regulator AsnC-type-like protein
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:EHH10435.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_1606_16
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16814..18016)
DNA (1203bp) protein (401aa)
Di-heme cytochrome c peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5] rbh
Methylamine utilization protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJA0_9RHIZ rbh
Methylamine utilization protein {ECO:0000313|EMBL:ESX74174.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_expt_1000_bf_scaffold_1606_17
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18024..18470)
DNA (447bp) protein (149aa)
UPI0003CFC917 related cluster n=1 Tax=unknown RepID=UPI0003CFC917
Auxin-binding protein {ECO:0000313|EMBL:CDX44540.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1606_18
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18653..20110)
DNA (1458bp) protein (486aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EXL09839.1}; EC=1.2.1.16 {ECO:0000313|EMBL:EXL09839.1};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
succinate-semialdehyde dehdyrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FBF18D rbh
succinate-semialdehyde dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_1606_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20264..21214)
DNA (951bp) protein (317aa)
transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000366C628
Auxin efflux carrier {ECO:0000313|EMBL:EHK56167.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
mdcF malonate transporter; K07088
SCNpilot_expt_1000_bf_scaffold_1606_20
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21409..21957
DNA (549bp) protein (183aa)
histidine phosphatase n=1 Tax=Rhizobium loti RepID=UPI0003620302
Histidine phosphatase {ECO:0000313|EMBL:ESY70903.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
putative phosphohistidine phosphatase SixA
SCNpilot_expt_1000_bf_scaffold_1606_21
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21954..22388)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CE58_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN03869.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
glutathione-dependent formaldehyde-activating protein
SCNpilot_expt_1000_bf_scaffold_1606_22
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22566..22847
DNA (282bp) protein (94aa)
Acyl carrier protein n=2 Tax=Mesorhizobium RepID=M5ERM2_9RHIZ
Acyl carrier protein {ECO:0000313|EMBL:CDX44513.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphopantetheine-binding protein
SCNpilot_expt_1000_bf_scaffold_1606_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22910..24097
DNA (1188bp) protein (396aa)
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
UPI0003CF43FA related cluster n=1 Tax=unknown RepID=UPI0003CF43FA
Beta-ketoacyl synthase {ECO:0000313|EMBL:CDX40329.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_expt_1000_bf_scaffold_1606_24
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24129..25400
DNA (1272bp) protein (424aa)
UPI0003CFF7CE related cluster n=1 Tax=unknown RepID=UPI0003CFF7CE
Beta-ketoacyl synthase, C-terminal domain protein {ECO:0000313|EMBL:AID30633.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
3-oxoacyl-(acyl-carrier-protein) synthase
SCNpilot_expt_1000_bf_scaffold_1606_25
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25458..26078
DNA (621bp) protein (207aa)
PREDICTED: synaptic vesicle membrane protein VAT-1 homolog n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17885
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:EZQ16694.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
alcohol dehydrogenase zinc-binding domain-containing protein
Displaying 25 items

View Taxonomy