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SCNpilot_expt_1000_bf_scaffold_3493

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3493_1
unknown

Not on your lists

2..79
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3493_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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209..577
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y1T5_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AID32800.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_3493_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(574..1545)
DNA (972bp) protein (324aa)
sugar-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003808335 rbh
Sugar-binding protein {ECO:0000313|EMBL:EXL01656.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
DeoR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_3493_4
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1776..2762
DNA (987bp) protein (329aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KF79_MESAW
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL01655.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
family 1 extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_3493_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2880..4583
DNA (1704bp) protein (568aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8H2_MESCW rbh
ABC transporter permease {ECO:0000313|EMBL:EZQ12851.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_3493_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4571..5455
DNA (885bp) protein (295aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHY1_MESAW
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL01653.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ATPase component of ABC-type sugar transporter
SCNpilot_expt_1000_bf_scaffold_3493_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5735..6829
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8H4_MESCW rbh
Beta-lactamase {ECO:0000313|EMBL:EZQ12849.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein; K07041 rbh
SCNpilot_expt_1000_bf_scaffold_3493_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6817..7554
DNA (738bp) protein (246aa)
5'-nucleotidase SurE n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KG68_MESAW rbh
Stationary phase survival protein SurE {ECO:0000313|EMBL:EZQ12848.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
5''/3''-nucleotidase SurE rbh
SCNpilot_expt_1000_bf_scaffold_3493_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7568..8242)
DNA (675bp) protein (225aa)
HAD-superfamily hydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZP4_9RHIZ
HAD-superfamily hydrolase {ECO:0000313|EMBL:EHK53747.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED
SCNpilot_expt_1000_bf_scaffold_3493_10
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8318..9001)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZP5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL01649.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3493_11
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9131..9568
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZP6_9RHIZ
Glucitol operon activator {ECO:0000313|EMBL:EXL01648.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glucitol operon activator
SCNpilot_expt_1000_bf_scaffold_3493_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9622..10383
DNA (762bp) protein (254aa)
PTS system protein II sorbitol-specific factor n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y1U6_MESOW rbh
PTS system protein II sorbitol-specific factor; K02783 PTS system, glucitol/sorbitol-specific IIC component rbh
PTS system protein II sorbitol-specific factor {ECO:0000313|EMBL:AEH86002.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_3493_13
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10401..11405
DNA (1005bp) protein (335aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69); K02782 PTS system, glucitol/sorbitol-specific IIB component [EC:2.7.1.69]; K02783 PTS system, glucitol/sorbitol-specific IIC component
UPI0003CE395A related cluster n=1 Tax=unknown RepID=UPI0003CE395A
PTS sorbitol transporter subunit IIB {ECO:0000313|EMBL:ESY70341.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_3493_14
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11428..11808
DNA (381bp) protein (127aa)
PTS system glucitol/sorbitol-specific IIA component; K02781 PTS system, glucitol/sorbitol-specific IIA component [EC:2.7.1.69]
Phosphotransferase system enzyme III n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZP9_9RHIZ
PTS cellobiose transporter subunit IIB {ECO:0000313|EMBL:EXL01645.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_expt_1000_bf_scaffold_3493_15
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11855..13546
DNA (1692bp) protein (564aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZQ0_9RHIZ rbh
phosphotransferase system HPr (HPr) family protein rbh
SCNpilot_expt_1000_bf_scaffold_3493_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13558..13812
DNA (255bp) protein (85aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphotransferase system enzyme I; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZQ0_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3493_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13905..14711)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZQ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ12840.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3493_18
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14866..15876
DNA (1011bp) protein (337aa)
UPI0003CFFF9C related cluster n=1 Tax=unknown RepID=UPI0003CFFF9C
LacI family transcriptional regulator {ECO:0000313|EMBL:ESZ26785.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
sugar-binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_3493_19
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15938..16678
DNA (741bp) protein (247aa)
UPI0003CFF38A related cluster n=1 Tax=unknown RepID=UPI0003CFF38A
GntR family transcriptional regulator {ECO:0000313|EMBL:ESZ20221.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3493_20
uncultured delta proteobacterium HF0200_19J16, Deltaproteobacteria, Proteobacteria, Bacteria

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17080..18141
DNA (1062bp) protein (354aa)
PREDICTED: arylsulfatase K-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16A19
Arylsulfatase a and related enzymes {ECO:0000313|EMBL:ADI17998.1}; TaxID=710831 species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0200_19J16.;"
sulfatase
SCNpilot_expt_1000_bf_scaffold_3493_21
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18087..18272
DNA (186bp) protein (62aa)
PREDICTED: arylsulfatase K-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16A19
Sulfatase {ECO:0000313|EMBL:EKE72976.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
sulfatase
SCNpilot_expt_1000_bf_scaffold_3493_22
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18385..19614
DNA (1230bp) protein (410aa)
UPI0003CFC72A related cluster n=1 Tax=unknown RepID=UPI0003CFC72A
MFS transporter {ECO:0000313|EMBL:ESZ20223.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
cyanate permease
SCNpilot_expt_1000_bf_scaffold_3493_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19611..20060)
DNA (450bp) protein (150aa)
UPI0003CF195B related cluster n=1 Tax=unknown RepID=UPI0003CF195B
Putative HTH-type transcriptional regulator rrf2-like {ECO:0000313|EMBL:CDX33213.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3493_24
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20282..21268)
DNA (987bp) protein (329aa)
Sulfate/thiosulfate-binding protein n=2 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KM05_MESAW
Thiosulfate transporter subunit {ECO:0000313|EMBL:EXL01640.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
sulfate/thiosulfate-binding protein
SCNpilot_expt_1000_bf_scaffold_3493_25
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21413..22459)
DNA (1047bp) protein (349aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
sulfate ABC transporter ATPase; K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
sulfate ABC transporter ATP-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D3E15D
SCNpilot_expt_1000_bf_scaffold_3493_26
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22472..23353)
DNA (882bp) protein (294aa)
Sulfate ABC transporter, inner membrane subunit CysW n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TE19_MESCW
Sulfate/thiosulfate transporter permease subunit {ECO:0000313|EMBL:EXL01638.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
sulfate ABC transporter permease; K02047 sulfate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_3493_27
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23346..24197)
DNA (852bp) protein (284aa)
UPI0003CF993E related cluster n=1 Tax=unknown RepID=UPI0003CF993E
Sulfate/thiosulfate transporter subunit {ECO:0000313|EMBL:EZQ12834.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
sulfate ABC transporter, permease protein CysT
SCNpilot_expt_1000_bf_scaffold_3493_28
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24194..25243)
DNA (1050bp) protein (350aa)
UPI0003D066CC related cluster n=1 Tax=unknown RepID=UPI0003D066CC
Sulfate transporter subunit {ECO:0000313|EMBL:ESZ20238.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
sulfate/thiosulfate-binding protein
SCNpilot_expt_1000_bf_scaffold_3493_29
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25510..26286)
DNA (777bp) protein (259aa)
penicillin-binding protein 1C (EC:2.4.1.129); K05367 penicillin-binding protein 1C [EC:2.4.1.-]
Penicillin-binding protein 1C n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEV6_9RHIZ
Penicillin-binding protein 1C {ECO:0000313|EMBL:CCV14886.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Displaying 29 items

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