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SCNpilot_expt_1000_bf_scaffold_444

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Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_444_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(408..890)
DNA (483bp) protein (161aa)
MarR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628561
MarR family transcriptional regulator {ECO:0000313|EMBL:KHK99138.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative MarR-family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_444_2
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1487..1996
DNA (510bp) protein (170aa)
luciferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B67EAB
Luciferase {ECO:0000313|EMBL:KFF98331.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
luciferase-like monooxygenase
SCNpilot_expt_1000_bf_scaffold_444_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1989..2696
DNA (708bp) protein (236aa)
Putative NADP oxidoreductase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L6Z6_9ACTO
Putative NADP oxidoreductase {ECO:0000313|EMBL:CCH19593.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
F420-dependent NADP oxidoreductase coenzyme
SCNpilot_expt_1000_bf_scaffold_444_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2966..4627
DNA (1662bp) protein (554aa)
Oligo-1,6-glucosidase {ECO:0000313|EMBL:KJQ54204.1}; EC=3.2.1.10 {ECO:0000313|EMBL:KJQ54204.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
glycosidase; K01187 alpha-glucosidase [EC:3.2.1.20]
alpha-glucosidase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349F6A4 rbh
SCNpilot_expt_1000_bf_scaffold_444_5
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

4734..5735
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E0D101 rbh
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_444_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5905..8190)
DNA (2286bp) protein (762aa)
Periplasmic beta-glucosidase {ECO:0000313|EMBL:KJL33429.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KJL33429.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glycoside hydrolase family 3 domain-containing protein; K05349 beta-glucosidase [EC:3.2.1.21] rbh
Beta-D-glucosideglucohydrolase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCM9_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_444_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8187..9248)
DNA (1062bp) protein (354aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQ05_LEIAQ rbh
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:KJL21812.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_444_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9251..10369)
DNA (1119bp) protein (373aa)
Putative oligopeptide ABC transporter, permease protein AppB n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZH7_LEIAQ rbh
Nickel transport system permease protein NikB {ECO:0000313|EMBL:KJL21813.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_444_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10366..11175)
DNA (810bp) protein (270aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7H7_LEIAQ rbh
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJL21814.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_444_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11172..11996)
DNA (825bp) protein (275aa)
Dipeptide ABC transporter, ATP-binding protein DppD family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP84_LEIAQ rbh
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KJL21815.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_444_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12371..13735)
DNA (1365bp) protein (455aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R5X4_LEIAQ rbh
Oligopeptide-binding protein OppA {ECO:0000313|EMBL:KJL21816.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
extracellular solute-binding protein family 5 protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_444_12
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13902..14543
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AD76C rbh
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93681.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_444_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14544..15734)
DNA (1191bp) protein (397aa)
Major facilitator superfamily MFS_1 n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BX78_BEUC1 rbh
Purine efflux pump PbuE {ECO:0000313|EMBL:KJL21810.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
major facilitator superfamily protein rbh
SCNpilot_expt_1000_bf_scaffold_444_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15836..16927
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FF8E6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL32112.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
xylanase/chitin deacetylase
SCNpilot_expt_1000_bf_scaffold_444_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16956..17846
DNA (891bp) protein (297aa)
Putative hydrolase YxeP {ECO:0000313|EMBL:KJL33422.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJL33422.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
metal-dependent amidase/aminoacylase/carboxypeptidase; K01451 hippurate hydrolase [EC:3.5.1.32]
Hippurate hydrolase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A733_9MICO
SCNpilot_expt_1000_bf_scaffold_444_16
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17953..18621)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003027C7D rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_444_17
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18744..19847)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3TG96_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC80491.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
Fe-S oxidoreductase
SCNpilot_expt_1000_bf_scaffold_444_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19974..20870)
DNA (897bp) protein (299aa)
3,4-dioxygenase subunit beta n=1 Tax=Agromyces subbeticus RepID=UPI0003B780BC rbh
Dioxygenase {ECO:0000313|EMBL:KJL34832.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
intradiol ring-cleavage dioxygenase
SCNpilot_expt_1000_bf_scaffold_444_19
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21041..21478
DNA (438bp) protein (146aa)
Transcriptional regulator n=1 Tax=Brevibacterium casei S18 RepID=K9AIB8_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EKU45816.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
MarR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_444_20
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21475..22080
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Brevibacterium casei S18 RepID=K9AT80_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EKU45817.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
SCNpilot_expt_1000_bf_scaffold_444_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22081..24138)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L330_9MICO rbh
Iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:KJL33406.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transport system permease protein; K02015 iron complex transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_444_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24266..25297)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0Y8_9MICO rbh
Iron(3+)-hydroxamate-binding protein FhuD {ECO:0000313|EMBL:KJL33405.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_444_23
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(25377..26240)
DNA (864bp) protein (288aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPS9_9MICO rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_444_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26270..27199
DNA (930bp) protein (310aa)
siderophore-interacting protein n=1 Tax=Nesterenkonia sp. F RepID=UPI000255C8B3 rbh
Vibriobactin utilization protein ViuB {ECO:0000313|EMBL:KJL21839.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Siderophore-interacting protein
SCNpilot_expt_1000_bf_scaffold_444_25
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27228..28268)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003025DA2 rbh
VanZ family protein {ECO:0000313|EMBL:EYT57774.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
glycopeptide antibiotics resistance protein
SCNpilot_expt_1000_bf_scaffold_444_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28346..30409
DNA (2064bp) protein (688aa)
DNA-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034604DF
Low-affinity putrescine importer PlaP {ECO:0000313|EMBL:KJL33419.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
amino acid transporters
SCNpilot_expt_1000_bf_scaffold_444_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30679..32355
DNA (1677bp) protein (559aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
potassium-transporting ATPase alpha (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
ATPase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003459721
SCNpilot_expt_1000_bf_scaffold_444_28
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32357..34519
DNA (2163bp) protein (721aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
kdpB; high-affinity K+ transport system, ATPase chain B; K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
potassium-transporting ATPase subunit B n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345F18C rbh
SCNpilot_expt_1000_bf_scaffold_444_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34541..35164
DNA (624bp) protein (208aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
cation transport ATPase component; K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003625F91
SCNpilot_expt_1000_bf_scaffold_444_30
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35164..37677
DNA (2514bp) protein (838aa)
Sensor protein KdpD {ECO:0000313|EMBL:KJL26726.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL26726.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
osmosensitive K+ channel histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347463E rbh
Displaying items 1-30 of 79 in total

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