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SCNpilot_expt_1000_bf_scaffold_761

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_761_1
Gordonia neofelifaecis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..386
DNA (384bp) protein (128aa)
Phage family integrase/recombinase protein n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YQ25_9ACTO
Phage family integrase/recombinase protein {ECO:0000313|EMBL:EGD53196.1}; TaxID=644548 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia neofelifaecis NRRL B-59395.;"
tyrosine recombinase
SCNpilot_expt_1000_bf_scaffold_761_2
unknown

Not on your lists

383..700
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_761_3
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1187..2389)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H2M6_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL87263.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_expt_1000_bf_scaffold_761_4
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(2386..3159)
DNA (774bp) protein (258aa)
DNA primase/polymerase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BAB2_9MICO
DNA primase/polymerase
Tax=BJP_IG2069_Chloroflexi_70_12
SCNpilot_expt_1000_bf_scaffold_761_5
unknown

Not on your lists

comp(3358..3681)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_761_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4690..5958
DNA (1269bp) protein (423aa)
ammonia channel protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036064FC
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ammonia permease; K03320 ammonium transporter, Amt family
SCNpilot_expt_1000_bf_scaffold_761_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5963..6562
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL19932.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCNpilot_expt_1000_bf_scaffold_761_8
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6658..7044)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1ZBI8_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI45065.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
methylmalonyl-CoA epimerase
SCNpilot_expt_1000_bf_scaffold_761_9
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7079..8230)
DNA (1152bp) protein (384aa)
Sodium/calcium exchanger family protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7LH15_NOCAA rbh
Leucobacter komagatae strain VKM ST2845 L_komagatae_01, whole genome shotgun sequence {ECO:0000313|EMBL:KIP53855.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
sodium/calcium exchanger family protein rbh
SCNpilot_expt_1000_bf_scaffold_761_10
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8354..9424
DNA (1071bp) protein (357aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI0002DF36BF rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94229.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_expt_1000_bf_scaffold_761_11
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9434..10612
DNA (1179bp) protein (393aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
beta-N-acetylglucosaminidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036F2103 rbh
SCNpilot_expt_1000_bf_scaffold_761_12
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10606..11484)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KW10_9MICO rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94224.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_761_13
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11481..12509)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348131F rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_761_14
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12523..13167)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D45812
Inner membrane protein YabI {ECO:0000313|EMBL:KJL20115.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_761_15
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13217..14575
DNA (1359bp) protein (453aa)
Aminodeoxychorismate synthase component 1 {ECO:0000313|EMBL:KJL20114.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KJL20114.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D0B9B rbh
anthranilate/para-aminobenzoate synthase component I
SCNpilot_expt_1000_bf_scaffold_761_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14679..17165
DNA (2487bp) protein (829aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
leucyl-tRNA synthetase n=1 Tax=Microbacterium barkeri RepID=UPI00036C0E20
SCNpilot_expt_1000_bf_scaffold_761_17
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17292..17939
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00037084AF
DNA uptake protein; K02237 competence protein ComEA
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_761_18
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17971..20250
DNA (2280bp) protein (760aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E8F27F rbh
membrane metal-binding protein; K02238 competence protein ComEC
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_761_19
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20329..21375
DNA (1047bp) protein (349aa)
DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III subunit delta n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KV91_9MICO rbh
DNA polymerase III subunit delta {ECO:0000313|EMBL:EQM83954.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
SCNpilot_expt_1000_bf_scaffold_761_20
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(21468..21728)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F2B00
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
30S ribosomal protein S20
SCNpilot_expt_1000_bf_scaffold_761_21
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21987..23348
DNA (1362bp) protein (454aa)
beta-galactosidase (EC:3.2.1.21); K05350 beta-glucosidase [EC:3.2.1.21] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000307B19F rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM83956.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
SCNpilot_expt_1000_bf_scaffold_761_22
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23345..24580
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003448E30 rbh
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KJQ55523.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
permease of the major facilitator superfamily
SCNpilot_expt_1000_bf_scaffold_761_23
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(24531..25253)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000300C3D2 rbh
hydrolase or acyltransferase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_761_24
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25334..27046)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVA6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM83959.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
oppA; extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_761_25
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27176..29119)
DNA (1944bp) protein (648aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJL20086.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL20086.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L089_9MICO rbh
ABC transporter ATPase rbh
SCNpilot_expt_1000_bf_scaffold_761_26
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29116..30048)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003085301 rbh
Oligopeptide transport system permease protein OppC {ECO:0000313|EMBL:KJL19760.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
oppC; oligopeptide transport system permease; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_761_27
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30050..31033)
DNA (984bp) protein (328aa)
ABC transporter permease n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349F873 rbh
ABC transporter permease {ECO:0000313|EMBL:EYT58989.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_761_28
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31288..33147
DNA (1860bp) protein (620aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
elongation factor 4 n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C568E rbh
lepA; membrane GTPase LepA; K03596 GTP-binding protein LepA
SCNpilot_expt_1000_bf_scaffold_761_29
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33233..33853
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVC2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL20082.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_761_30
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33853..35073
DNA (1221bp) protein (407aa)
hemN; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0C7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM83965.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
Displaying items 1-30 of 46 in total

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