ggKbase home page

SCNpilot_expt_500_p_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 290 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_17_1
unknown

Not on your lists

301..642
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_17_2
Simkania negevensis, Simkania, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(836..1891)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L8R8_SIMNZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB89211.1}; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 / Z).;"
SCNpilot_expt_500_p_scaffold_17_3
unknown

Not on your lists

comp(2152..3150)
DNA (999bp) protein (333aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_17_4
unknown

Not on your lists

3190..3294
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_17_5
Cellulophaga phage phi4:1, Caudovirales, Viruses

Not on your lists

3450..4169
DNA (720bp) protein (240aa)
Metallophosphatase n=2 Tax=Podoviridae RepID=R9ZWT3_9CAUD
Metallophosphatase {ECO:0000313|EMBL:AGO49431.1}; TaxID=1328029 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Cellulophaga phage phi4:1.;"
metallophosphoesterase
SCNpilot_expt_500_p_scaffold_17_6
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

4311..4751
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1D1_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC74076.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_17_7
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4800..6890)
DNA (2091bp) protein (697aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
pnp; polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] rbh
Polyribonucleotide nucleotidyltransferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYC8_PARAV rbh
SCNpilot_expt_500_p_scaffold_17_8
Waddlia chondrophila, Waddlia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(7277..7546)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=2 Tax=Waddlia chondrophila RepID=D6YV94_WADCW
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=765953 species="Bacteria; Chlamydiae; Chlamydiales; Waddliaceae; Waddlia.;" source="Waddlia chondrophila 2032/99.;"
SCNpilot_expt_500_p_scaffold_17_9
unknown

Not on your lists

comp(8011..9390)
DNA (1380bp) protein (460aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_17_10
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(9592..9852)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYP1_PARAV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIA78295.1}; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_17_11
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

9962..10636
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDH8_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC75774.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_17_12
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10638..11147
DNA (510bp) protein (170aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
tRNA-specific adenosine deaminase n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YV96_WADCW
hypothetical protein
SCNpilot_expt_500_p_scaffold_17_13
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

11134..11379
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDH6_PARUW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAF23373.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
SCNpilot_expt_500_p_scaffold_17_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(11470..12204)
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYP5_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ81051.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_17_15
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12307..13221)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L0T5_PARAV
Rhomboid family protein {ECO:0000313|EMBL:KIC74091.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_17_16
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


13730..14050
DNA (321bp) protein (107aa)
50S ribosomal protein L31 type B n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RL31B_PARUW
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rpmE2; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_expt_500_p_scaffold_17_17
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14112..15179
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0T2_PARAV rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 rbh
SCNpilot_expt_500_p_scaffold_17_18
Waddlia chondrophila, Waddlia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(15452..16546)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Waddlia chondrophila RepID=D6YUJ7_WADCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI37808.1}; TaxID=716544 species="Bacteria; Chlamydiae; Chlamydiales; Waddliaceae; Waddlia.;" source="Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044).;"
SCNpilot_expt_500_p_scaffold_17_19
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

16652..17557
DNA (906bp) protein (302aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia s
ywkE; protein methyltransferase hemK-like protein; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] rbh
Release factor glutamine methyltransferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0T1_PARAV rbh
SCNpilot_expt_500_p_scaffold_17_20
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


17599..18927
DNA (1329bp) protein (443aa)
Signal recognition particle protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDH1_PARUW rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
ffh; signal recognition particle protein; K03106 signal recognition particle subunit SRP54 rbh
SCNpilot_expt_500_p_scaffold_17_21
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


18918..19250
DNA (333bp) protein (111aa)
30S ribosomal protein S16 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0S9_PARAV
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
SCNpilot_expt_500_p_scaffold_17_22
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19261..19950
DNA (690bp) protein (230aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] rbh
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0S8_PARAV rbh
SCNpilot_expt_500_p_scaffold_17_23
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


19954..20385
DNA (432bp) protein (144aa)
50S ribosomal protein L19 n=2 Tax=Waddlia chondrophila RepID=D6YVA6_WADCW
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
SCNpilot_expt_500_p_scaffold_17_24
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20393..21076
DNA (684bp) protein (228aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RNH2_PARUW
SCNpilot_expt_500_p_scaffold_17_25
unknown

Not on your lists

21493..22299
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_17_26
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22488..31016
DNA (8529bp) protein (2843aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RBS1_9CHLA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCB86453.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
SCNpilot_expt_500_p_scaffold_17_27
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

31158..32045
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDG5_PARUW
UPF0701 protein YloC {ECO:0000313|EMBL:KIC74106.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_17_28
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

32035..32622
DNA (588bp) protein (196aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=KGUA_PARUW
SCNpilot_expt_500_p_scaffold_17_29
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

32641..32952
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0R5_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC74108.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_17_30
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

32967..33596
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0R4_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC75826.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
Displaying items 1-30 of 290 in total

View Taxonomy