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SCNpilot_expt_500_p_scaffold_5608

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5608_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16..534)
DNA (519bp) protein (173aa)
Transposase IS4 family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYA3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIL13892.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Transposase, IS982 family
SCNpilot_expt_500_p_scaffold_5608_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(584..1171)
DNA (588bp) protein (196aa)
integrase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B4A2
Uncharacterized protein {ECO:0000313|EMBL:AIL13775.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
integrase catalytic region; K07498 putative transposase
SCNpilot_expt_500_p_scaffold_5608_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1178..1303)
DNA (126bp) protein (42aa)
integrase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AC7C
Integrase {ECO:0000313|EMBL:AIL13445.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_5608_4
unknown

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1372..1575
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_5608_5
Frischella perrara, Frischella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1938..4481)
DNA (2544bp) protein (848aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003809CE0
TPR repeat, SEL1 subfamily protein {ECO:0000313|EMBL:AJA44929.1}; TaxID=1267021 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Frischella.;" source="Frischella perrara.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_5608_6
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4652..6004)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2Z258_PSEAC
extracellular repeat-containing protein, HAF family
Extracellular repeat protein, HAF family {ECO:0000313|EMBL:AEG01499.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
SCNpilot_expt_500_p_scaffold_5608_7
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6149..7129)
DNA (981bp) protein (327aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACL45604.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACL45604.1};; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
sensory transduction histidine kinase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B497
multi-sensor hybrid histidine kinase
Displaying 7 items

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